Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01965 ATGCTAACTTTTCTGTTTGCAAGATTGTCTTCTTCTTCACTGCCATGCCGGAGGACAACCCAGTTAGGGTTTCTTCATCACAATGCATCCCTCATTTCCTATTCGTTTTCTTCGGTTTCGAAATTGTCTCAATCAAATCAACCCAAAAAAGATAGAGGTGGAAATTTTTCTTTCACGGTTTCTTGCCTTATGAACTCACTTGGCATGTCCACCGAAGTTGCTACTAAATTATCGAAAAGGCTTAAACTGAAAGACCCAGATCAACCCGATTCGGTACTTAACCTTCTCAGAAGCTACGGATTCTCAGATCCACAGATATCCAAAATTGTGGGTTGCTATCCACAGGTGCTTTTGGCAAATCTTGAGCACAATCTTTTGCCCAGGCTAAGGTTTGTCCAGTCTATAGGGTTTTCAGCTTCTGAAATTCCAGAACTCTTCTCGTTTAACCCTTCATTACTCATATTGAGCTTAGAGAAACGTATAATTCCCCACTATGAGGTTCTTAAAAGTGTACTTGATGATGGCGGGAAAGGAAGGAAATGTCTAAAATATTCTACTTGGAGTATTCGATCCTATGATGTGAAGAATATAGTCCCAAACATAAAGGTTTTGAGAGATGAAGGAGTGCCTCAATCTTCTGTCTATAATCTGTTATCTAGGCGTGCAAATGTAGCATTTATGAATCGATCATTGTTTGTTGAATATGTCAAATTTGTAAAGGAAACCGGAATCGAGCCTTCCAAGGCTGCGTTTGTTGAAGCACTTATAGTTGTTACACAGTTGCGTAAATCTACCTGGGAGTTGAAACTTGATATCTTTGAGAGGTGTGGCTGGTCCAGGGATGTCACTCTTTTGGCATTCAGTAAGTATCCAAATATCATGGGCATGTCAGAGAAAAAAATCACAAGCATAATGAAGTTTTTTGTTGATGAAATGGGTTTGCGGTTGGAAGATATAGCTGGATGCCCTACAATTCTTAGCTATAGCATGAAGCAGAGGATTGTTCCTAGATGGTCAGTAGTCAAAATTTTGAAAATGAAGGGTTTAATTAAGGAAAGTGTGTCCCTTAATTCTGTTATTATAATCAGTGAGAAAAAGTTTCTGGATAATTTTGTGTTCAAATTTCAAGAAAATGTTCCTCGGCTACTGGAAATCTATAGAGGTGGGTTGGGATATTTTCCTGAAGTTCGTGCATAG 1197 0.3885 MLTFLFARLSSSSLPCRRTTQLGFLHHNASLISYSFSSVSKLSQSNQPKKDRGGNFSFTVSCLMNSLGMSTEVATKLSKRLKLKDPDQPDSVLNLLRSYGFSDPQISKIVGCYPQVLLANLEHNLLPRLRFVQSIGFSASEIPELFSFNPSLLILSLEKRIIPHYEVLKSVLDDGGKGRKCLKYSTWSIRSYDVKNIVPNIKVLRDEGVPQSSVYNLLSRRANVAFMNRSLFVEYVKFVKETGIEPSKAAFVEALIVVTQLRKSTWELKLDIFERCGWSRDVTLLAFSKYPNIMGMSEKKITSIMKFFVDEMGLRLEDIAGCPTILSYSMKQRIVPRWSVVKILKMKGLIKESVSLNSVIIISEKKFLDNFVFKFQENVPRLLEIYRGGLGYFPEVRA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01965 398 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Accr4g01965 398 SMART mt_12 316 347 IPR003690 GO:0003690|GO:0006355
Accr4g01965 398 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Accr4g01965 398 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
Accr4g01965 398 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
Accr4g01965 398 Pfam mTERF 263 368 IPR003690 GO:0003690|GO:0006355
Accr4g01965 398 Pfam mTERF 93 306 IPR003690 GO:0003690|GO:0006355
Accr4g01965 398 Gene3D Transcription termination factor 3, mitochondrial 179 378 IPR038538 -
Accr4g01965 398 PANTHER CGI-12 PROTEIN-RELATED 57 373 IPR003690 GO:0003690|GO:0006355
Accr4g01965 398 FunFam Mitochondrial transcription termination factor-like 157 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01965 Accr-Chr4 23421876 23423072 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01965 mTERF 1.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01965 K15031 - qsa:O6P43_021047 310.457