Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01963 ATGCTAACTTTTCTGATTGCGAGATTATCTTTGTCCTTTCCAAGTGGTACGAGAAGCCAATTAGGGTTTCTCCGGCTCAATGCTTACCACATCTCTTATTCGTTTTCTTCGGTTGTGAAATCATCTGAATCAAATCACTCCGGACAAAATCGAGTCGAAAGCGAGTCGTTTACAGTTTCTTACCTCGTGAACTCTTGTGCCGTGTCCGCTAGAGATGCTGAAAGATTATCCAAAAGGGTTAAACTGAAAGACCCTGATAAACCCGACTCGGTACTTCAACTTCTTCGAAGTTACGAATTCTCAGACACTCATATATCCAAAGTTTTGAAATACTATCCACGATTGCTTTTGGCAAAGCCCGAGAGCAACCTTTTACCCAAGCTAAGGTTTTTCCAGTCTATAGGGTTCTCAGCTTCTGAAATCCCAGAGTTCGTCTGTTCTAACTATAAATTACTAACTTTTAGCTTAGAAAAACATATAATTCCCCTTTACGAGGCCCTTAAAAGTGTACTAGGTGATCCTGTTAAAGCAAGGAGATGTTTGAAAAGCTCAAGGTCAAGGTGGAGAGATAGGCATAGCTATGTTGTAACGAATATATTTCCAAACATAAAGGTCTTGAGAGATGAAGGAATGCCTCAATCTTCTGTCAATAGTCTGTTGTCTAGGCGTGCAAATGTAGCATTTATGAATCGATCATTGTTTGTTGAATATGTCAAGTTTGTCAAGGAGACGGGAATCGAACCATCGAAGGCTGCGTTTGTTGAAGCACTTCTTGTTGTTACACAGTTGAGTAAATGTACCTGGGAGTTGAAACTTGATATCTTTGAGAGGTGTGGCTGGTCCAGGGATGTCACTCTTTTGGCATTCCGTAAGTTTCCAAAAATCATGGGCATGTCAGAAAAAAAAATCACAAGCATAATGAAGTTTTTTATTGATGAAATGGGTTTGCGGTTGGAAGATATAGCTGGATGCCCTACAATTCTTAGCTATAGCATGAAGCAGAGGATTGTTCCTAGATGGTCAGTAGTTAAAATTTTGAGAACGAAGGATTTAATCAAGGAAAGTCTGTCCGTAAATTTTGTTATTATAATGAGTGAGAAAAAGTTTCTGGATAATTTTGTGTTCAAATTTCAAGAAAATGTTCCTCGGCTGCTGGAAATCTATAGAGGAATTTAA 1176 0.3886 MLTFLIARLSLSFPSGTRSQLGFLRLNAYHISYSFSSVVKSSESNHSGQNRVESESFTVSYLVNSCAVSARDAERLSKRVKLKDPDKPDSVLQLLRSYEFSDTHISKVLKYYPRLLLAKPESNLLPKLRFFQSIGFSASEIPEFVCSNYKLLTFSLEKHIIPLYEALKSVLGDPVKARRCLKSSRSRWRDRHSYVVTNIFPNIKVLRDEGMPQSSVNSLLSRRANVAFMNRSLFVEYVKFVKETGIEPSKAAFVEALLVVTQLSKCTWELKLDIFERCGWSRDVTLLAFRKFPKIMGMSEKKITSIMKFFIDEMGLRLEDIAGCPTILSYSMKQRIVPRWSVVKILRTKDLIKESLSVNFVIIMSEKKFLDNFVFKFQENVPRLLEIYRGI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01963 391 PANTHER CGI-12 PROTEIN-RELATED 53 375 IPR003690 GO:0003690|GO:0006355
Accr4g01963 391 FunFam Mitochondrial transcription termination factor-like 156 381 - -
Accr4g01963 391 Gene3D Transcription termination factor 3, mitochondrial 62 190 IPR038538 -
Accr4g01963 391 Gene3D Transcription termination factor 3, mitochondrial 191 380 IPR038538 -
Accr4g01963 391 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Accr4g01963 391 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Accr4g01963 391 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Accr4g01963 391 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Accr4g01963 391 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Accr4g01963 391 Pfam mTERF 262 370 IPR003690 GO:0003690|GO:0006355
Accr4g01963 391 Pfam mTERF 92 303 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01963 Accr-Chr4 23379718 23381842 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01963 mTERF 7.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01963 K15031 - qsu:111998476 305.064