Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01962 ATGCGAACTTTTCTGATTGCGAGATTATCTTCGTCTTTTCCATGCGGTACGAGAACCCAATTAGGGTTTCTCCGGCTCAATGCTTACCACATCTCTTATTCGTTTTCTTCGGTAGTGAAATCATCTGAATCAAATCACTCCGAACAAAATCGAGTCGAAAGTGAGTCGTTTACAGTTTCTTACCTCGTGAACTCATGTGCCGTGTCCGCTAGAGATGCTGAAAAATTATCCGAAAGGGTTAAACTGAAAGATCCTGATAAACCCGACTCCGTACTTAAACTTCTTCGAACCTACGAATTCTCAGACACTCATATATCCAAAGTTTTGAAATACTATCCACGATTGCTTCTGGCAAAGCCCGAGAGCAACCTTTTACCCAAGCTAAGGTTTTTCCAGTCTATAGGGTTCTCAGCTTCTGAAATCCCAGAACTCGTCTCTTCTAACTATAAATTACTAACTTTTAGCTTAGAGAAACGTATAATTCCCATTTACGGGGCTCTTAAAAGTGTACTGGGTGATCCTGTTAAAGCAAGGAGATGTTTGAAAAGCTCAAGGTGGAGAGATAGGCATAGCTATGGTGTAACGAATATATTTCCAAACATAAAGGTCTTGAGAGATGAAGGAGTGCCTCAATCTTCTGTCCATAGTCTGTTATCTAGGCGTGTAAATGTAGCCTTTATGAATCGATCATTGTTTGTTGAATATGTTGAGTTTGTCAAGGAAACCGGAATTGAACCTTCCAAGGCTGCGTTTGTTGAAGCACTTATTGTTGTTACGCAGTTGAGTAAATCTACCTGGGAGTTGAAACTTGATATCTTTGAGAGGTGTGGCTGGTCCAGGGATGTCACTCTTTCGGCATTCAGTAAGTTTCCAAATATCATGGGCTTGTCAGAGAAAAAAATCACAAGCATAATGAAGTATTTTGTTGATGAAATGGGTTTGCGGTTGGAAGATATAGCTGGATGCCCTACGATTCTTGGCTATAGCATGAAGCAGAGGATTGTTCCTAGATGGTCAGTAGTTAAAATTTTGAAAATGAAGGGTTTAATCAAGGAAACTGTGTCTCTAAATTCTGTTATTATAATCAGTGAGAAAAAGTTTCTGGATAATTTCGTGTTCAAATTTCAAGAAAATGTTCCTCGGCTACTGGAAATCTATAGAGGTGAGTTGGGATATTTTCCTGTAGTTCGTGCATAG 1197 0.3952 MRTFLIARLSSSFPCGTRTQLGFLRLNAYHISYSFSSVVKSSESNHSEQNRVESESFTVSYLVNSCAVSARDAEKLSERVKLKDPDKPDSVLKLLRTYEFSDTHISKVLKYYPRLLLAKPESNLLPKLRFFQSIGFSASEIPELVSSNYKLLTFSLEKRIIPIYGALKSVLGDPVKARRCLKSSRWRDRHSYGVTNIFPNIKVLRDEGVPQSSVHSLLSRRVNVAFMNRSLFVEYVEFVKETGIEPSKAAFVEALIVVTQLSKSTWELKLDIFERCGWSRDVTLSAFSKFPNIMGLSEKKITSIMKYFVDEMGLRLEDIAGCPTILGYSMKQRIVPRWSVVKILKMKGLIKETVSLNSVIIISEKKFLDNFVFKFQENVPRLLEIYRGELGYFPVVRA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01962 398 Gene3D Transcription termination factor 3, mitochondrial 186 378 IPR038538 -
Accr4g01962 398 Gene3D Transcription termination factor 3, mitochondrial 57 185 IPR038538 -
Accr4g01962 398 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Accr4g01962 398 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Accr4g01962 398 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Accr4g01962 398 SMART mt_12 215 245 IPR003690 GO:0003690|GO:0006355
Accr4g01962 398 SMART mt_12 316 347 IPR003690 GO:0003690|GO:0006355
Accr4g01962 398 PANTHER CGI-12 PROTEIN-RELATED 53 373 IPR003690 GO:0003690|GO:0006355
Accr4g01962 398 FunFam Mitochondrial transcription termination factor-like 156 379 - -
Accr4g01962 398 Pfam mTERF 259 368 IPR003690 GO:0003690|GO:0006355
Accr4g01962 398 Pfam mTERF 92 302 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01962 Accr-Chr4 23371443 23372639 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01962 mTERF 9.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01962 K15031 - qsu:112035834 304.293