Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01960 ATGCTAAATTTTCTGATTTCAAGATTATCTTCTTCGTCACTGCCATGCTGGAGGACAACCCAGTTCGGGTTTCTTCAGCACAATGCATCGCTCATTTCCTATTCGTTTTCTTCGGCTGCGAAATTTGCTCAATCAAATCAACCAGAACAAAATCGACATGGAAGTTTTACTTTTACGGTTTCTTATCTTATGAACAATTTTGGCATGTCCGCCGAAGCGGCTGGTAAATTATCGACAAGGTTTGAATTGAAAGACCTAGATAAACCCAATTCCGTACTTAGTCTTCTCAGAAGCTACGAATTCTCAGATGCTCAGATATTTAAAATTGTGAAATGCTTTCCCCAAGTACTTGCAGCAAATCCTGAGCATAACCTTTTGCCCAAACTAAGGTTTATCCATTCTGTAGGATTCTCAGCTTCTGAAATCCCAGAACTATTCTCTTCCTACCCAACATTACTATTTTTAAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCCCTTAAAACGGTACTTGGTGATGATTGCAAAGTCAAGAGATGTTTGAAAGGCTCAAGGTGGAACGTTGTCTCCTATGGTGTAATGAACATAGTTCCAAACATAAATTTTTTGAGGGATGAAGGAGTGCCTCAATCTTCTGTCCTTACTCTGTTATATAGAAGTGCAAATGTGGCTTTTATCAATCAATCAAAGTTTGTTGATAATGTCAAGTTTATCAAGGAAACAGGAATTCAACCTTTCAAGGGTGCGTTCATTGATGCACTTATGGTTGTATCACTGGTTGGTAAATCAACCTGGGAGTCGAAACTGGACATCTTTGAGAGGTTGGGCTGGTCCAGAGATGTCACTCTTTCTGCATTCAGTAAGTTTCCAAGCATCATGCGTATGTCAGAGGAAAAAATCACAAATATGATGAAGTTTTTTGTGGATCAAATGGGTTTACAATTGGAAGATATAGCCGGGTGCCCCACAATTTTTAGCTATAGTTTGAAGCGGCGGATTATTCCCAGATGGTCAGTAGTTAAAATTTTGAGAATGAAGGGATTAATCAAGGGCAATATGTCCCTACTTACCATTATTATTATGGGTGAGAAAAAGTTTGGTGAAAATTTTGTGATGAAATTTCAGGAAAGCGTTCCTCAGCTCCTGGAACTCTATAGCGGTGCATCGAGAGCTGTTCCTGAAGTTCTAGCATAG 1197 0.3926 MLNFLISRLSSSSLPCWRTTQFGFLQHNASLISYSFSSAAKFAQSNQPEQNRHGSFTFTVSYLMNNFGMSAEAAGKLSTRFELKDLDKPNSVLSLLRSYEFSDAQIFKIVKCFPQVLAANPEHNLLPKLRFIHSVGFSASEIPELFSSYPTLLFLSLEKRIIPHYEALKTVLGDDCKVKRCLKGSRWNVVSYGVMNIVPNINFLRDEGVPQSSVLTLLYRSANVAFINQSKFVDNVKFIKETGIQPFKGAFIDALMVVSLVGKSTWESKLDIFERLGWSRDVTLSAFSKFPSIMRMSEEKITNMMKFFVDQMGLQLEDIAGCPTIFSYSLKRRIIPRWSVVKILRMKGLIKGNMSLLTIIIMGEKKFGENFVMKFQESVPQLLELYSGASRAVPEVLA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01960 398 Pfam mTERF 93 245 IPR003690 GO:0003690|GO:0006355
Accr4g01960 398 Pfam mTERF 259 367 IPR003690 GO:0003690|GO:0006355
Accr4g01960 398 Gene3D Transcription termination factor 3, mitochondrial 174 379 IPR038538 -
Accr4g01960 398 PANTHER CGI-12 PROTEIN-RELATED 54 374 IPR003690 GO:0003690|GO:0006355
Accr4g01960 398 SMART mt_12 316 347 IPR003690 GO:0003690|GO:0006355
Accr4g01960 398 SMART mt_12 143 175 IPR003690 GO:0003690|GO:0006355
Accr4g01960 398 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
Accr4g01960 398 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Accr4g01960 398 FunFam Mitochondrial transcription termination factor-like 157 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01960 Accr-Chr4 23343319 23344515 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01960 mTERF 6.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01960 K15031 - gmx:100775533 294.664