Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01957 ATGCCTAATTTTCTGATCGCCAGGTTATCTTTGTTACAGCCGTGCTGGAGGACAACCCAGTTAGGGTTTCTTCATCACAATGCATCCCTCATTTCCTGTTCGTTTTCTTCGGTTGCGAAATTGTCCCAATCAAATCAACTCAAAAAAGATAGAGGTCAAAATTTTTTGTTTACAGTTTCTTATCTCATGAACAAATTTGGCATGTCCGCTGAAGTGGCTGGTAAATTATCGAGAAGGTTTGAATTGAAAGACCCGGATAAATCCGATTCCGTACTTAGTCTTCTTAGAAGCTACGAATTCTCAGATGCTCAGATATTTAAAATTGTGAAATGCTTTCCCCAAGTGCTTGCAGCAAATCCTGAGCATAACCTTTTGCCCAAACTAAGATTTGCCCATTCTGTAGGATTCTCAGCTTCTGAAATCCCAGAACTGTTCTCTTCCAACCCTACATTACTATCTTTAAGCTTAGAGAAACGTATAACTCCCCACTATGAGGCCCTTAAAAGGGTAGTTGGTGATGATTGCAAAGTGAAGAAATGTTTGAAAAACTCAAGGTGGAACGTTTGCTCCTATGGGTTAAAGAACGTAGTTCCAAACATGAAGGTTTTGAGAGATGAAGGAGTGCCTCAATCTTCTGTCATTACTCTGTTGTCTAGAAGTGCAAATGTTTTATTTATCGATCAATCAAAGTTTGTTGAATATGTCAAATTTCTCAAGGAAACAGGAATTGAACATTTCAAGGTTACATTCATTGATGCGCTTATAGTTGTAATAAAGGTTGGTAAATCAAACTGGGAGTTGAAACTGGATATCTTTGAGAGGTTGGGCTGGTCCAGAGATGTCACTCTTTTGGCATTCAGTAAGTGTCCACATATCATGCGGTACTCAGAGGTAAAAATCACAAACACAATGAAGTTCTGTTTGGATGAAATTGGTTTCCAGTTGAAAGATATAGCCGGGTGCCCGACAATTTTTTGCTATAGTTTGAAGCAGAGGATTATTCCCAGATGGTCAGTAGCTAAAATTTTGAAAATGAAGGGTTTAATCAAGGCTAATATGTCAATATCTTCCATGATGATTATGAGTGAGAAAAAGTTTCGGGAAAATTTTTTGATCAAATTTCAGGGAAGTGTTCCGCAGCTGCTGGAACTCTATAGCGGTGAATTGAGACCTTCATCTGAAGTGTTGCTCTGA 1194 0.3861 MPNFLIARLSLLQPCWRTTQLGFLHHNASLISCSFSSVAKLSQSNQLKKDRGQNFLFTVSYLMNKFGMSAEVAGKLSRRFELKDPDKSDSVLSLLRSYEFSDAQIFKIVKCFPQVLAANPEHNLLPKLRFAHSVGFSASEIPELFSSNPTLLSLSLEKRITPHYEALKRVVGDDCKVKKCLKNSRWNVCSYGLKNVVPNMKVLRDEGVPQSSVITLLSRSANVLFIDQSKFVEYVKFLKETGIEHFKVTFIDALIVVIKVGKSNWELKLDIFERLGWSRDVTLLAFSKCPHIMRYSEVKITNTMKFCLDEIGFQLKDIAGCPTIFCYSLKQRIIPRWSVAKILKMKGLIKANMSISSMMIMSEKKFRENFLIKFQGSVPQLLELYSGELRPSSEVLL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01957 397 Gene3D Transcription termination factor 3, mitochondrial 155 375 IPR038538 -
Accr4g01957 397 SMART mt_12 214 244 IPR003690 GO:0003690|GO:0006355
Accr4g01957 397 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
Accr4g01957 397 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Accr4g01957 397 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Accr4g01957 397 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Accr4g01957 397 FunFam Mitochondrial transcription termination factor-like 156 378 - -
Accr4g01957 397 Pfam mTERF 92 248 IPR003690 GO:0003690|GO:0006355
Accr4g01957 397 Pfam mTERF 258 366 IPR003690 GO:0003690|GO:0006355
Accr4g01957 397 PANTHER CGI-12 PROTEIN-RELATED 57 372 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01957 Accr-Chr4 23322714 23323907 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01957 mTERF 8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01957 K15031 - qsa:O6P43_021047 287.73