Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01956 ATGCTAATTTTTCTGATTGCAAGATTCTCTTCTTCACTGCGGACGAGAGCCCAGTTAGGGTTTCGTCATCACTATGCATCCCACATTTACTATTCGTATTCTTCCGTTGCGAAATTATCTCAATCAAATCGACTGGAACAAACGAGGGATGAAAATCATTCGTTTACGGTTTCTTACCTCATGAATTCATGTGGCCTATCCGCCAAAGTTGCTGGTGAAGTATCGAAAAGGGTTGAACTGAAAGACTCCGATAAACTCAATTCCATGCTTAATCTTCTTAGAAGCTACGGATTCCTAGATCCACAGATATCCAAACTTGTGACATGCTATCCACGGGTGCTTTTGGCAAATCCTGAGCACAATCTTTTGCCCAGGCTAAGGTTTTTTCAGTCTATAGGGTTTTCAGCTTCTGAAATGTCAGAACTATTCTCTTATAACCCGAAGTTACTAATGTTAGGCTTAGAGAAACGTATAATTCCCCACTACGAGGCCCTTAAAAGCGTACTTCATGATGATTGGAAAGTAAGGAAATGTCTAAAATGCTCTACTTGGAGTATTGGCTCCTATGATGTAAAGAATATAATCCCAAACATAAAGTTTTTGAGAGATGAAGGAGTGCCTGAATCTTTGATATTCTCTCTGTTATCTAGACGTGCAAATGTAGCATTTATGAATCAATCCAAGTTTGGTGAATATGTCAAGTTTGTCAAGGAAACAGGAATTGAACCTTTCAAGGCTGCGTTTGTTGAAGCACTTGTAGTTGTAACACAGGTGAATAAATCAACCTGGGAGTTGAAACTGGATACCTTTGAGAGATTTGGCTGGTCCAGGGAGGTCACTCTTTTTGCATTCAGTAGGGCTCCAAAGATCATGGCTATGTCAGAGAAAAATATTGCAGACACAATGAAGTTTTTAATAGATAAAATGGGTTTGCGGTTGGAAGATATAACTGGAAACCCATGCATTCTTAGATATAGCTTGAAGAATAGGATAGTTCCTAGATGGTCAGTAGTAAAAATTTTGAAAATGAAGGGCTTAATCAAGGATGATATATCCCTAACTACCATCATTGTTACGGGTGAGAACAAGTTTCTGGAAGATTTCGTGATTAAATTTCAGGAAAGTGTTCCTCAGCTACCAAAACTCTATAAAGGTGAATTGGGACCTTTACCTGAAGTTCAGGCCTAG 1188 0.3897 MLIFLIARFSSSLRTRAQLGFRHHYASHIYYSYSSVAKLSQSNRLEQTRDENHSFTVSYLMNSCGLSAKVAGEVSKRVELKDSDKLNSMLNLLRSYGFLDPQISKLVTCYPRVLLANPEHNLLPRLRFFQSIGFSASEMSELFSYNPKLLMLGLEKRIIPHYEALKSVLHDDWKVRKCLKCSTWSIGSYDVKNIIPNIKFLRDEGVPESLIFSLLSRRANVAFMNQSKFGEYVKFVKETGIEPFKAAFVEALVVVTQVNKSTWELKLDTFERFGWSREVTLFAFSRAPKIMAMSEKNIADTMKFLIDKMGLRLEDITGNPCILRYSLKNRIVPRWSVVKILKMKGLIKDDISLTTIIVTGENKFLEDFVIKFQESVPQLPKLYKGELGPLPEVQA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01956 395 Gene3D Transcription termination factor 3, mitochondrial 174 375 IPR038538 -
Accr4g01956 395 Pfam mTERF 256 364 IPR003690 GO:0003690|GO:0006355
Accr4g01956 395 Pfam mTERF 90 311 IPR003690 GO:0003690|GO:0006355
Accr4g01956 395 FunFam Mitochondrial transcription termination factor-like 154 376 - -
Accr4g01956 395 PANTHER CGI-12 PROTEIN-RELATED 51 371 IPR003690 GO:0003690|GO:0006355
Accr4g01956 395 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Accr4g01956 395 SMART mt_12 212 242 IPR003690 GO:0003690|GO:0006355
Accr4g01956 395 SMART mt_12 176 207 IPR003690 GO:0003690|GO:0006355
Accr4g01956 395 SMART mt_12 140 172 IPR003690 GO:0003690|GO:0006355
Accr4g01956 395 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Accr4g01956 395 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01956 Accr-Chr4 23310005 23311192 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01956 mTERF 4.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01956 K15031 - qsu:112035834 308.916