Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01955 ATGGATAATGCGAACGAAGCATCATCCTCCTTGAGTTTTGCATCATCTTACTTATCAAATGGGTCAAGTAATCCCAACATATCTGCCTGTCCTAGCCATGAGCATGTGGCGAATCTTGAAAATTTGAGCCTCAGTAAGCTGAGTGGAAGCCTTGAGAAGCTACTGATAGATCGTGAATATGACTATAGTGATGTTGATATTGTTGTTGAGGGCAGATCTGTGGGTGTTCATAGGTGTATATTGGCCTCACGTAGTCAGTTTTTTCATGATCTTTTTAAGAAAGGAAATGACGGCTCGGTGAAGGAAGGTAAGCCAAAGTATCTCATGTCAGAGCTGGTGCCTTATGGCTTCGTTGGACATGAAGCATTCTGTGTTTTCTTGCATTATTTGTATACTGGAAAGATGAAGGCGTCACCCCCTGAAGTATCAACATGTGTTGATGAATCATGTATACATGATGCATGCTGGCCTGCTATTAACTATGCTTTAGAGCTAATGTATGCTTCTGCCACGTTTCAGATGAAAGAGCTTGTTTTACTTGTTCAGAGGCATCTCCTCAATTTTGTTGAGAAGGCTCTTGTCGAAGATGTGATTCCTATTCTTATGGCTGCCTTCCACTGCCAACTAGACCTGCTTCGGTCACAGTGCATCCAAAGATTAGCAAGATCTGACCTTGAGAACACAACTTTGGATAGAGAGCTCCCACCTGAAGTTTTTAGTGAAATCAAATCACTCCAACGCAAAGCTCTGGCAGAATCCACTCCTGATGCAATGGAAGTGGAATCTTCAAATGAAAAAAGTATTAGGCGAATCCTTAAAGCGTTGGACTCTGATGATATTGAGCTGATGACTCTTCTATTGAACGAGTCTAGTGTCAATCTAGATGATGCTTATGCCCTTCACTATGCCTGTGCCTATTGTGATCCTAAGATTGTTAAAGAAGTTCTTAATCTTGGGTTGGCTGAAGTAAACCATACAAATCGCCGAGGGTATTCAGTTCTTCACGTGGCCGCAAGGCGCAAAGATCCTACAATTTTAGTGGCATTGTTGACGAAAGGAGCCTGTGTGTCAAATATCACACCAGATGGACGAACAGCTGTTGCGATTTGCCGGAGGATGACGAGACCCAAGGATTATAATGAGATAGAAGAGCGGGGCAAGGAATCTAACAAAGACAAGCTCTGTGTTGATCTCCTGGACAGAGAAATGAGAAGAACTTCAATGTCTGTGAATGCATCTGTTTCATCAGAGTTAACTGCTGATGATTTGCACATGAGGCTTGATTACCTGGAAAATAGAGTTGCATTTGCTAGGCTGTTGTTTCCTGCTGAGGCTAAGGTGGCCATAGAAAATGCTGAGGTTGAGTCGACATTATACTCAAACCCACCGAGAGGCTCAAATGGCATCCTAAGAGAAGTTGATCTAAATGAAACTCCTTTTATGAGAACCAGAAAACTGCAGTTAAGATTGCAATCCCTTCTGAAAACAGTTGAGAATGGCCGGCGCTTCTTTCCCCATTGCTCTGACGTCCTTGATAAGTTTCTGGACGACGATATGCTGGATATTTTCTTCTTAGAGAAGGGTAGCGAACAAGAACAGAGAATCAAGAAGCAACGCTTCATGGAGCTTAAAGAGGATGTGCAGAAGGCATTTCATAAGGATATGGCTGAAAACAACGGTTCAGGTTTTTCCTCTGTTTCTTCCTCATCATCCTCATCTAAGAAAGGTCTCAGCCAAAGAGTGAGGAAAAAGTGA 1755 0.4262 MDNANEASSSLSFASSYLSNGSSNPNISACPSHEHVANLENLSLSKLSGSLEKLLIDREYDYSDVDIVVEGRSVGVHRCILASRSQFFHDLFKKGNDGSVKEGKPKYLMSELVPYGFVGHEAFCVFLHYLYTGKMKASPPEVSTCVDESCIHDACWPAINYALELMYASATFQMKELVLLVQRHLLNFVEKALVEDVIPILMAAFHCQLDLLRSQCIQRLARSDLENTTLDRELPPEVFSEIKSLQRKALAESTPDAMEVESSNEKSIRRILKALDSDDIELMTLLLNESSVNLDDAYALHYACAYCDPKIVKEVLNLGLAEVNHTNRRGYSVLHVAARRKDPTILVALLTKGACVSNITPDGRTAVAICRRMTRPKDYNEIEERGKESNKDKLCVDLLDREMRRTSMSVNASVSSELTADDLHMRLDYLENRVAFARLLFPAEAKVAIENAEVESTLYSNPPRGSNGILREVDLNETPFMRTRKLQLRLQSLLKTVENGRRFFPHCSDVLDKFLDDDMLDIFFLEKGSEQEQRIKKQRFMELKEDVQKAFHKDMAENNGSGFSSVSSSSSSSKKGLSQRVRKK 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01955 584 MobiDBLite consensus disorder prediction 554 584 - -
Accr4g01955 584 SMART BTB_4 63 189 IPR000210 GO:0005515
Accr4g01955 584 Pfam NPR1/NIM1 like defence protein C terminal 371 570 IPR021094 -
Accr4g01955 584 FunFam regulatory protein NPR3-like 263 403 - -
Accr4g01955 584 Gene3D - 263 403 IPR036770 -
Accr4g01955 584 PANTHER REGULATORY PROTEIN NPR3 13 577 IPR044292 GO:0009862|GO:2000022|GO:2000031
Accr4g01955 584 MobiDBLite consensus disorder prediction 558 576 - -
Accr4g01955 584 Pfam BTB/POZ domain 60 181 IPR000210 GO:0005515
Accr4g01955 584 Gene3D Potassium Channel Kv1.1; Chain A 30 221 IPR011333 -
Accr4g01955 584 ProSiteProfiles Ankyrin repeat region circular profile. 329 354 - -
Accr4g01955 584 Pfam Ankyrin repeats (3 copies) 278 355 IPR002110 GO:0005515
Accr4g01955 584 SUPERFAMILY Ankyrin repeat 261 374 IPR036770 -
Accr4g01955 584 ProSiteProfiles Ankyrin repeat profile. 329 361 IPR002110 GO:0005515
Accr4g01955 584 ProSiteProfiles BTB domain profile. 63 139 IPR000210 GO:0005515
Accr4g01955 584 FunFam Regulatory protein NPR3 37 221 - -
Accr4g01955 584 SUPERFAMILY POZ domain 49 187 IPR011333 -
Accr4g01955 584 SMART ANK_2a 329 358 IPR002110 GO:0005515
Accr4g01955 584 SMART ANK_2a 295 325 IPR002110 GO:0005515
Accr4g01955 584 CDD BTB_POZ_NPR_plant 52 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01955 Accr-Chr4 23287045 23290681 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr4g01955 NPR1_like_C 2.5e-81 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01955 K14508 - gmx:100816582 796.193