Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01945 ATGTCTGAAAGAGATTCCACTACGCTGCTGCTAGCATTATTGTTGTCTGTTGCTTCCTTTGCATCTGTTGCTGCTGGAGATGGCGAAGCAAAAGCTCTGTTGAACTGGAGAGATAGTTTCAACGACAAAAGCAAACCTACTTTGTCCTCTTGGATCAATCACACTAATCTTTGCAGAAACTGGAAGGGGATTTCATGCGACAAATCCATGTCTGTGATCAACATAAGTCTCCCAAATCTTAACCTACAAGGTACACTTTACAGTCTCAACTTCGCTGCCTTTCCTAATCTCCTATACTTCGACATAAGCTGGAACCAATTATATGGAAACATTCCCCACGAAATTGGTAATTTGTCTAGTCTTTTGATGTTGAATTTGTCAAATAATTCATTTCGGAGTCCCATTCCTCCTGAAACCTGTAATCTAACCACGCTATATCGACTTGATCTTACTACATGTAAATTCACCGGACAAATTCCCCATGAAATTGGGAATTTGAGGAATTTGAAAGTCCTGTGGCTTGGATATAATTCCCTTTCTGGTTCCATTCCTGAAGAAATTGGAATGTTGAGCAATCTTTTAGAGCTTCATTTGGGAAGCAACTCTCTGTCTGGGAGAATCCCATCATCAATAGGAAACTTGACCATGTTACAACAGCTTTTTCTTCAAGAGAACAAACTCGCAGGTGCTATTCCTAATGAATTATGGAAACTCTATTATCTCAATAACATTCAGTTATACGATAATAGAGTTTCTGGGCCAATCTCTCCCTCTATAGGAAATATGACAAACCTCGCCAAATTGTACCTGTACAACAACAGTTTCAATGGTCAACTTCCACAAGAAATGAATAACTTGACAAGTTTGCGAGACATACGACTGAGTGATAATCATTTCAGTGGTCCTTTGCCCCAACAAATTTGTCAAAGTGGGATGTTAGCAAACCTTTCTGCTGATCATAACCATTTCACTGGTCCTATTCCAACAAGTTTGAAGGATTGTTCAAGTCTAAAAAGACTCAGCCTTGATAATAACCAAATAATTGATAATATAACAGATGCATTGGGAGTATATCCTTATTTGGACTTCATTGATTTAAGTGGTAATCAATTGTATGGATACCTTTCATCCAGGTGGGGGAAGTGTCAAAACCTCACACAATTGATTATTCACAATAACAAGCTTTCTGGTGATATACCTCCAGAACTGGGAGAGATCACTAAACTTGGTTTGCTTAACTTGTCTTCAAATCATTTGTCTGGAAAAATTCCAAAAGAACTAGGGAATTTGACCAAGTTGATGAAACTCTCTTTGAGCCATAATAACTTCTCTGGTAATGTCCCTTCAAATATAAGATCACTTAGCCAGCTTGAAATTTTGGAGTTAGCTGCAAATAATTTCAATGGCTCAGTCACAAGAGAGCTTGGGGAATTAAAGGGCTTAAGGGTCTTGAATTTGAGCAAAAACAAATTTGATGAAAGCATTCCTCTTGAGTTTGGTGAACTCCAAGAACTTGAACAACTTGATCTTAGTGACAATTTGCTAATTGGAACAATACCTTCGTCGCTTGGAATGTTACCCAAATTGCAATTACTAAACCTCTCACACAATAATCTCACTGGCACTATTCCTTCCAGTTTCAGTGGGTCGATGTCAGCTTTGTTTGATGTTGACATATCATACAATCAATTAGAAGGCCCCATTCCAATCAAGCCGGCCTTTCACAACTTTGATGCATTGAAGAATAATGGTTTGTGTGGTAATGTCACTGGTTTAAGTTCTTGTGACAATTCACAAACAAATCGACATGGCCATAAGATCAGCATAAAGTACTGGATAATATTCCTTCTGTTGGCCATACTTCTACTAGTACTTATTGGAGGATCTTTCATTTTTTATCGAATGGTAACAAAAGCAAAGAACAAAGATGAAGAAGCTCTACTAGAAGATGTTTTTTTTGTACGGATTCTTGAAAAAGAAATATTGTACAAAGATGTCATCAAAGCCACAGAGGAGTTTGATGACAAATATCTTATTGGGAAAGGGAGCCAAGGAAGTGTTTATAGGGCAGAGTTGCCTACAGGTGACATTTTTGCTGTAAAGAAGCTTCATTCAATATCAAGTTGGGAAATGTCCAGCCGTAAAGCTCTTATAAGTGAGATTCAAGCTTTAAAAGAAATCAAACATCGTAACATTGTAAAATTGTATGGGTTTTTCTCCAACGCACAATTCTCCATTTTGGTTTTTGAGTTCTTGGAAGGTGGTAGGTTGGATAACATACTAAAGAATGAGGAACAAGCCATTGAGTTTAATTGGAAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCTAATGCTTTGTCTCATATGCATCGTGGTTGTTCAACTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCAGAATACGAAGAAGCTCACATCATTGACTTTGGAACCGCAAAGTTTTTGAATCCTAATTTAAGCAACATGACCTGGTTCCTTGGCACAGTTGGGTATGTTGCACCAGAGATTGCTTTCACTATGAAAGCGAACGAGAAATGTGATGTTTATAGTTTTGGAGTATTGACTTTAGAAATTATCATGGGAAAACATCCAAGAGAGCTTATTTTATCTTTGGCGGAGAATTCAACCACCAAAGACTTGTTGTTAAAGGAGATATTGGACCCACGACTTTATACCTTGAGAAAACCAGTTCCACGTGAAGTCATTTTAGTTGCAAAAATAGCATTTTCTTGCTTGAATGAGAATCCACAATCTCGTCCAACCATGGAACAAGTATCTATAGAGCTCGTAAGGACTCCGGAATCTCATTTGCTGGATCAATTTTACACTCTCACAATTGGACAACTCATGAGGGATTGA 2895 0.3782 MSERDSTTLLLALLLSVASFASVAAGDGEAKALLNWRDSFNDKSKPTLSSWINHTNLCRNWKGISCDKSMSVINISLPNLNLQGTLYSLNFAAFPNLLYFDISWNQLYGNIPHEIGNLSSLLMLNLSNNSFRSPIPPETCNLTTLYRLDLTTCKFTGQIPHEIGNLRNLKVLWLGYNSLSGSIPEEIGMLSNLLELHLGSNSLSGRIPSSIGNLTMLQQLFLQENKLAGAIPNELWKLYYLNNIQLYDNRVSGPISPSIGNMTNLAKLYLYNNSFNGQLPQEMNNLTSLRDIRLSDNHFSGPLPQQICQSGMLANLSADHNHFTGPIPTSLKDCSSLKRLSLDNNQIIDNITDALGVYPYLDFIDLSGNQLYGYLSSRWGKCQNLTQLIIHNNKLSGDIPPELGEITKLGLLNLSSNHLSGKIPKELGNLTKLMKLSLSHNNFSGNVPSNIRSLSQLEILELAANNFNGSVTRELGELKGLRVLNLSKNKFDESIPLEFGELQELEQLDLSDNLLIGTIPSSLGMLPKLQLLNLSHNNLTGTIPSSFSGSMSALFDVDISYNQLEGPIPIKPAFHNFDALKNNGLCGNVTGLSSCDNSQTNRHGHKISIKYWIIFLLLAILLLVLIGGSFIFYRMVTKAKNKDEEALLEDVFFVRILEKEILYKDVIKATEEFDDKYLIGKGSQGSVYRAELPTGDIFAVKKLHSISSWEMSSRKALISEIQALKEIKHRNIVKLYGFFSNAQFSILVFEFLEGGRLDNILKNEEQAIEFNWKKRVNVVKGVANALSHMHRGCSTPIVHRDISSKNVLLSSEYEEAHIIDFGTAKFLNPNLSNMTWFLGTVGYVAPEIAFTMKANEKCDVYSFGVLTLEIIMGKHPRELILSLAENSTTKDLLLKEILDPRLYTLRKPVPREVILVAKIAFSCLNENPQSRPTMEQVSIELVRTPESHLLDQFYTLTIGQLMRD 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01945 964 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 287 599 - -
Accr4g01945 964 SUPERFAMILY Protein kinase-like (PK-like) 656 938 IPR011009 -
Accr4g01945 964 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Accr4g01945 964 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Accr4g01945 964 ProSitePatterns Tyrosine protein kinases specific active-site signature. 797 809 IPR008266 GO:0004672|GO:0006468
Accr4g01945 964 FunFam Leucine-rich repeat receptor protein kinase MSP1 636 751 - -
Accr4g01945 964 FunFam Nuclear pore complex protein NUP107 26 185 - -
Accr4g01945 964 SMART LRR_typ_2 430 454 IPR003591 -
Accr4g01945 964 SMART LRR_typ_2 118 142 IPR003591 -
Accr4g01945 964 SMART LRR_typ_2 166 189 IPR003591 -
Accr4g01945 964 SMART LRR_typ_2 286 310 IPR003591 -
Accr4g01945 964 SMART LRR_typ_2 262 285 IPR003591 -
Accr4g01945 964 SMART LRR_typ_2 526 549 IPR003591 -
Accr4g01945 964 SMART LRR_typ_2 478 501 IPR003591 -
Accr4g01945 964 SMART LRR_typ_2 190 213 IPR003591 -
Accr4g01945 964 SMART LRR_typ_2 502 525 IPR003591 -
Accr4g01945 964 SMART LRR_typ_2 214 238 IPR003591 -
Accr4g01945 964 FunFam Uncharacterized protein 186 275 - -
Accr4g01945 964 Gene3D Transferase(Phosphotransferase) domain 1 752 952 - -
Accr4g01945 964 SUPERFAMILY L domain-like 58 328 - -
Accr4g01945 964 Gene3D Phosphorylase Kinase; domain 1 634 751 - -
Accr4g01945 964 ProSiteProfiles Protein kinase domain profile. 673 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01945 964 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Accr4g01945 964 Gene3D Ribonuclease Inhibitor 183 284 IPR032675 -
Accr4g01945 964 Gene3D Ribonuclease Inhibitor 287 599 IPR032675 -
Accr4g01945 964 SUPERFAMILY RNI-like 255 582 - -
Accr4g01945 964 FunFam MDIS1-interacting receptor like kinase 2 752 947 - -
Accr4g01945 964 Pfam Protein kinase domain 675 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01945 964 PANTHER LEUCINE RICH REPEAT KINASE 2 237 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01945 Accr-Chr4 23143397 23146379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01945 4 850 Receptor kinase-like Gene Family AT4G08850 40.899 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g01945 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01945 - - pcin:129295243 982.63