Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01944 ATGTCTGAAAGAGATTCCACTACGCTGCTGCTAGCATTATTCTTGTCTGTTGCTTCCTTTATTGCATCTGTTGCTGCTGGAGATGGCGAAGCAAAAGCTCTGTTGAACTGGAGAGATAGCTTCAACGACGAAAGCAAACTTACCTTGTCCTCTTGGAGCAATCACACTAATCTTTGCAGAAACTGGAAGGGGATTTCATGCGACAAATCCGTGTCTGTGATCAGCATAAGTCTCTCAAATCTTAACCTTCAAGGTACACTTTCCAGTCTCAAATTCGCTGCCTTTCCTAATCTCCTCTACTTCGACATAAGCTACAACCAATTATATGGAAACATTCCCCACGAAATTGGTAATTTGTCCAGTCTTTTGATGTTGAATTTGTCAGATAATTCATTTAGGGGTCCCATTCCTCCAGAAATCTGGAATCTAACCACTCTAAATCGACTTGATCTTACTACATGTAAATTCACAGGACAAATTCCCCATGAAATTGGGAATTTGAGGAATTTGAATGTCCTGTGTCTTGGAGATAATTCCCTTTCTGGTTCCATTCCTGAAGAAATTGGAATGTTGAGCAATCTTTTACAACTTGATTTGGCAAAGAACTCTCTGTTAGGGAGAATCCCATCATCAATAGGAAACTTGACCATGTTACAAAATCTTTTTCTTTATAAGAACAATCTCGAAGGTCCTATTCCTAATGAATTGTGGAAACTCTATTATCTCAATGACATTCAGTTATACAATAATAGACTTTCTGGGCCAATCTCTCCCTTTATAGGAAACCTAACAAATCTCGAACAATTGGCCTTTAATGATAACCGATTTCGTGGTCCACTTCCTCCGTCCATTGGCAACTTGATCAATTTATTTCATTTCAGCCTTCCAGACAACAATCTTTCAGGCCTTATTCCTTCTACTATAGGAAATATGACAAACCTCGCCAAACTATACCTGTTCAACAACAGTTTCAGTGGTAAACTTCCACAAGAAATGAATAACTTGACAAGTTTGCAAGACATACAACTGAGTAATAATCATTTCAGTGGTCCTTTGCCCCAAAAAATTTGTCAAAGTGGGATGTTAGCTTTCCTTTATGCTGATCATAACCATTTCACTGGCCCTATTCCAACAAGTTTGAAGGATTGTTCAAGTCTAAAAAGACTCAGCCTTGAAAATAACCAAATAGTTGATAATATAACAGATGCATTGGGAGTATATCCTCATTTGAACTACATTGACTTAAGCGGTAATCAATTGTATGGCTATCTTTCATCCAGGTGGAGGAAGTGCCAGAACCTCACACAATTGATTATTCACAATAACAAGCTTTCTGGTGATATACCTCCAGAACTAGGAGAAATAACTCAACTTGGTTTGCTTAACTTGTCTTCAAATCATTTGTCTGGAAAAATTCCAAAAGAATTAGAGAAGTTGATCATGTTGATGAAACTCTCTTTGAGCCATAATAACTTATCTGGTAATGTCCCTTCAAATATAAGATCACTTAGCCAACTTGAAATTTTGGAGTTAGCTGCAAATAATTTCAATGGCTCAGTTACAAGAGAGCTTGGGGAATTAAAAAGCTTAAGGGTCTTGAACTTGAGCAAAAACAAATTTGATGAAAGCATTCCCCTTGAGTTTGGTAAACTCCAAGAACTTGAACTACTTGATCTAAGCGACAACTTGCTAATTGGAACAATACCATCAAGGATTGGAATGTTACCCAAATTGCAAGTATTGAACCTCTCACACAATAATCTCACTGGAAATATTCCTTCCGGTTTTAGTGGGTCGATGTCAGCTTTGTCTAATGCTGACATATCATACAATCAATTAGAAGGCCCCATTCCAATCAAGCTGGCCTTTCACAACTTTGATGCATTAAGGAATAATAAAGGTTTGTGTGGTAATGTCACTGGTTTAAGTTCTTGTGACAATTCACAAACAAATCGACATGGCCATAAGAGCAAAAAGTTCTTGATGATATTCCTTCCATTGGCCGTACTGCTACTGGTACTTGCTGGAGGATCTTTCATTTTTTATCGAATGGTAGCAAAAGCAAAGAACAAAAATGAAGAAGCTCTACTAGAAAATGTTTATTTTGTACGGAGTCTTGAAAGAGAATTGTACAAAGATGTCATCAAATCCACAGAGAATTTTGATGACAAATATCTTATTGGGAAAGGGAGCCAAGGAAGTGTTTATAGGGCAGAGTTGCTTACAGGTGACATTGTTGCTATAAAGATGCTTCATTCAATGTCAAGTGGGAAAATCTCCAACCGTGAAGCTTTTACAAGTGAGATTCAAGCTTTAACAGAAATCAAACATCGTAACATTGTAAAGTTATATGGGTTTTTCTCCAATTCCCAATTCTCAATTTTGATTTATGAGTTCTTGGAAGGTGATAGGTTGGATAACATACTAAAGAATGAGGAACAAGCCATTGAGTTTAATTGGAAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCTAATGCTTTGTCTCATATGCATCATGGTTGTTCAACTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTCCTAAGTTCAGAATATGAAGAAGCTCACATCATTGACTTTGGCGCTGCAAAGTTTTTGAATCCTAATTCAAACAACATGACAAAGTTTGTTGGCACATTTGGGTACGCTGCACCAGAGAATTCAACCACCAAAGACTTGTTGTTAAAGGAGGTGTTGGACCCACGACTTTATACCTTGAGAAAGCCGGTTCCACGTGAAGTCATCTTAATTGCAAAAATAGCATTTTCTTGTTTGAATGAGAATCCACAGTCTCGTCCAACCATGGAACAAGTATCTAAAGAGCTCATAAGGACTCCGGAATCGCACTTGCTGGATCAATTTTACACTATCACAATTGGGCAGCTCATGAGGGATTGA 2925 0.3771 MSERDSTTLLLALFLSVASFIASVAAGDGEAKALLNWRDSFNDESKLTLSSWSNHTNLCRNWKGISCDKSVSVISISLSNLNLQGTLSSLKFAAFPNLLYFDISYNQLYGNIPHEIGNLSSLLMLNLSDNSFRGPIPPEIWNLTTLNRLDLTTCKFTGQIPHEIGNLRNLNVLCLGDNSLSGSIPEEIGMLSNLLQLDLAKNSLLGRIPSSIGNLTMLQNLFLYKNNLEGPIPNELWKLYYLNDIQLYNNRLSGPISPFIGNLTNLEQLAFNDNRFRGPLPPSIGNLINLFHFSLPDNNLSGLIPSTIGNMTNLAKLYLFNNSFSGKLPQEMNNLTSLQDIQLSNNHFSGPLPQKICQSGMLAFLYADHNHFTGPIPTSLKDCSSLKRLSLENNQIVDNITDALGVYPHLNYIDLSGNQLYGYLSSRWRKCQNLTQLIIHNNKLSGDIPPELGEITQLGLLNLSSNHLSGKIPKELEKLIMLMKLSLSHNNLSGNVPSNIRSLSQLEILELAANNFNGSVTRELGELKSLRVLNLSKNKFDESIPLEFGKLQELELLDLSDNLLIGTIPSRIGMLPKLQVLNLSHNNLTGNIPSGFSGSMSALSNADISYNQLEGPIPIKLAFHNFDALRNNKGLCGNVTGLSSCDNSQTNRHGHKSKKFLMIFLPLAVLLLVLAGGSFIFYRMVAKAKNKNEEALLENVYFVRSLERELYKDVIKSTENFDDKYLIGKGSQGSVYRAELLTGDIVAIKMLHSMSSGKISNREAFTSEIQALTEIKHRNIVKLYGFFSNSQFSILIYEFLEGDRLDNILKNEEQAIEFNWKKRVNVVKGVANALSHMHHGCSTPIVHRDISSKNVLLSSEYEEAHIIDFGAAKFLNPNSNNMTKFVGTFGYAAPENSTTKDLLLKEVLDPRLYTLRKPVPREVILIAKIAFSCLNENPQSRPTMEQVSKELIRTPESHLLDQFYTITIGQLMRD 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01944 974 Gene3D Ribonuclease Inhibitor 196 360 IPR032675 -
Accr4g01944 974 PRINTS Leucine-rich repeat signature 482 495 - -
Accr4g01944 974 PRINTS Leucine-rich repeat signature 575 588 - -
Accr4g01944 974 FunFam Leucine-rich repeat receptor protein kinase EMS1 186 282 - -
Accr4g01944 974 Gene3D Ribonuclease Inhibitor 27 187 IPR032675 -
Accr4g01944 974 PANTHER LEUCINE RICH REPEAT KINASE 2 246 900 - -
Accr4g01944 974 ProSiteProfiles Protein kinase domain profile. 721 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01944 974 SUPERFAMILY RNI-like 294 636 - -
Accr4g01944 974 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Accr4g01944 974 Pfam Protein kinase domain 723 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01944 974 Gene3D Ribonuclease Inhibitor 361 654 IPR032675 -
Accr4g01944 974 Gene3D Transferase(Phosphotransferase) domain 1 801 963 - -
Accr4g01944 974 Gene3D Phosphorylase Kinase; domain 1 682 799 - -
Accr4g01944 974 ProSitePatterns Tyrosine protein kinases specific active-site signature. 845 857 IPR008266 GO:0004672|GO:0006468
Accr4g01944 974 FunFam Nuclear pore complex protein NUP107 27 185 - -
Accr4g01944 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 336 649 - -
Accr4g01944 974 SUPERFAMILY Protein kinase-like (PK-like) 701 951 IPR011009 -
Accr4g01944 974 SUPERFAMILY L domain-like 46 396 - -
Accr4g01944 974 SMART LRR_typ_2 575 598 IPR003591 -
Accr4g01944 974 SMART LRR_typ_2 119 143 IPR003591 -
Accr4g01944 974 SMART LRR_typ_2 551 574 IPR003591 -
Accr4g01944 974 SMART LRR_typ_2 479 503 IPR003591 -
Accr4g01944 974 SMART LRR_typ_2 215 239 IPR003591 -
Accr4g01944 974 SMART LRR_typ_2 263 287 IPR003591 -
Accr4g01944 974 SMART LRR_typ_2 527 550 IPR003591 -
Accr4g01944 974 SMART LRR_typ_2 335 359 IPR003591 -
Accr4g01944 974 SMART LRR_typ_2 167 191 IPR003591 -
Accr4g01944 974 FunFam Leucine-rich repeat receptor protein kinase MSP1 685 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01944 Accr-Chr4 23085609 23088735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01944 4 916 Receptor kinase-like Gene Family AT4G08850 41.509 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g01944 Pkinase 1.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01944 - - pcin:129295243 1132.47