Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01925 ATGGCGAATGAGAAGGATCATTACTACGATCAGTATGATCTGAATAATTTCTACAATTACAACCACCACCAGAATCTTGTTCAAGGGTTTGATCATCAACATCATCCTTCTGCTAATTCACACAGTACTTCTGGTGCGAGCTTCACAGATTGCTTAAATGGAGGGTTCATGGACTATAATGTTCTCTCAAGAGCCTTTGACTTGTCTTGTTCATCAGCTTCTGAAGTGATCTCTTCCTCCATTAACGATCATGATCAGCTCAATAATCCAAAGAAGCCATCAGAAACTAGTCCTACGACTACCGTAGGAGATTCTCAAGTAGTGAGGCTCAATTCCTCTGTGTCGAATTCGTCATCTAATAATGAAGCGGAAGAAGCCGTTGTCACAGAAGAAGACTCAGCCAAAAGCTTCAAAAAAGAGAAGGACCAAGATGCAGACCAAATGTCAAAGAAAGAGAACAAGGGAAAAGGGAATAATACAAATAAGAAAGAGAAAAAGGCAAGGGAGCCGCGTTTTGCGTTCTTGACTAAAAGTGAGGTTGATCACTTAGAAGATGGCTATCGATGGAGAAAATATGGTCAGAAAGCCGTCAAGAACAGTCCTTACCCCAGGAGTTATTATAGATGCACTAGTCAGAAGTGCAATGTGAAGAAGAGAGTGGAGAGGTCATTCCAGGACCCATCAGTTGTGGTCACAACATATGAAGGCCAGCACAACCACCACTGTCCGGCCACACTTCGCGGCAGTGCCAACGCCGCCATGATGTTATCATCGGCCGCCGCATCGCCTTCGCTCTTCGGCTCTTCACCAATGGGTAGGACAGCCATGTTTCCCCAAGAACTTCTTGCTCAGTTCCTTCCAAGCTACCAAGGAGATGATCATCTTCATCACCAAAACCATCCCATGTTCCATCAAAACCCTAATAATAATAACAATAATAATTCTCACCACCACCACCACCACCAAGTCCCTCTCGACCATGGCTTGTTACAAGACCTTTTGCCTCCTTCTTCATCTTCATCCTTCCCTGGTAGACAACAAGAACAATGA 1050 0.4419 MANEKDHYYDQYDLNNFYNYNHHQNLVQGFDHQHHPSANSHSTSGASFTDCLNGGFMDYNVLSRAFDLSCSSASEVISSSINDHDQLNNPKKPSETSPTTTVGDSQVVRLNSSVSNSSSNNEAEEAVVTEEDSAKSFKKEKDQDADQMSKKENKGKGNNTNKKEKKAREPRFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCNVKKRVERSFQDPSVVVTTYEGQHNHHCPATLRGSANAAMMLSSAAASPSLFGSSPMGRTAMFPQELLAQFLPSYQGDDHLHHQNHPMFHQNPNNNNNNNSHHHHHHQVPLDHGLLQDLLPPSSSSSFPGRQQEQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01925 349 ProSiteProfiles WRKY domain profile. 178 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g01925 349 FunFam WRKY transcription factor 57 169 243 - -
Accr4g01925 349 Gene3D WRKY domain 169 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g01925 349 Coils Coil 120 140 - -
Accr4g01925 349 MobiDBLite consensus disorder prediction 81 168 - -
Accr4g01925 349 MobiDBLite consensus disorder prediction 81 124 - -
Accr4g01925 349 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 316 IPR044810 GO:0003700
Accr4g01925 349 MobiDBLite consensus disorder prediction 128 168 - -
Accr4g01925 349 SMART WRKY_cls 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g01925 349 Pfam WRKY DNA -binding domain 184 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g01925 349 MobiDBLite consensus disorder prediction 333 349 - -
Accr4g01925 349 MobiDBLite consensus disorder prediction 291 349 - -
Accr4g01925 349 SUPERFAMILY WRKY DNA-binding domain 176 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01925 Accr-Chr4 22586046 22588116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01925 36 277 WRKY Transcription Factor Family AT4G18170 49.804 5.68e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr4g01925 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01925 - - aprc:113847247 276.944