Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01924 ATGTCGTCCAATAGTTCTTTGAATGTGCAGTTGTCTAAGAAGACGACATTTTTGGGTTTGAAACTATGGGTCTTAATTGGGATAGGTGTGGGTGCATTTATAGTCCTCATTCTTTCTATATTATCCATATGGGCGATGTTTTGGAGAAAATCAAAGAGACCGCTCAACAAATACACTACCACATCACAAATACCAAATGTGTCGAAAGAGATCAAGGTTGATAAGGTTGGAGTGCAGAGCTCTTATAATCACCCAGGAAGTGTATATGTTCACTTGCATGAGAAGGCAAGTGATAAGAATCCTGATAAGTTGTTAGTTCAGTCAGGCATGAGCAAATTCAGTGATCCAGACAATATTAGTCAGTGTAGTTCAATATACCATCACGGGAGAGGAGGTAGTTCGATGTCGGGCGAGGATGGAAGTTCTGGGACCTTCAGGAAGCAATCTGGATTATCATATGGTGGAATAGTGACTGCCTCTCCTTTAATTGGTTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGGGATCTTGATCTTGCAACAAACCGGTTCTCGGCAGAGAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACCGGGGAATGTTGATCAATGGGACCGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAAGCAGAGAAAGAGTTCAGGGTTGAAGTGGAAGCTATAGGTCATGTTCGTCATAAGAATCTTGTACGCCTGCTTGGATACTGCATTGAAGGAGTTCACAGAATGCTTGTGTATGAGTATGTGAATAATGGTAACTTAGAGCAATGGTTACATGGGGCCATGCGCCAGCATGGGACACTTACCTGGGAGGCCCGCATGAAAGTTATAACTGGTACAGCCAAAGCGCTTTCATACTTGCATGAAGGGATAGAACCAAAAGTTGTTCATCGTGACATAAAATCCAGCAACATATTAATCGATGATGAGTTCAATGCGAAGGTTTCTGACTTCGGCTTGGCCAAGCTCTTGGGTTCAGGAGAAAGTCACATAACAACTAGAGTCATGGGAACATTCGGTTATGTGGCACCCGAGTATGCAAATACTGGTTTGTTAAATGAGAAGAGCGATGTTTACAGCTTTGGTGTTTTACTTCTTGAAGCCATTACTGGAAGGGACCCAGTAGACTATGCACGTCCTGCTAATGAGGTTAACCTTGTTGAATGGCTCAAGCTTATGGTCAGTGCTAGAAGAGCTGAGGAAGTCATAGACCCGAGCCTTGAGGTTAAACCATCAACACGGGAATTAAAACGCGCCCTTCTGGTTGCACTTAGGTGTCTTGATCCTGCTGCAGAGAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGTTTGAAGCTGATGAAAATCCATTCCGAGAGGATCGAAGGAACCGAAAGGGCCACATTGCTGGCATGGAAATTGAAACCACGAAGGATCTTAATGGTGGACCTTATGCTGGGAAAAATGGGGATCCTGAAAGCCATAAGCCAGAGGCAACTAAGAGTATGATTGACAATCATGGTAACTTGGCCTAG 1563 0.4395 MSSNSSLNVQLSKKTTFLGLKLWVLIGIGVGAFIVLILSILSIWAMFWRKSKRPLNKYTTTSQIPNVSKEIKVDKVGVQSSYNHPGSVYVHLHEKASDKNPDKLLVQSGMSKFSDPDNISQCSSIYHHGRGGSSMSGEDGSSGTFRKQSGLSYGGIVTASPLIGLPEFSHLGWGHWFTLRDLDLATNRFSAENVIGEGGYGVVYRGMLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKVITGTAKALSYLHEGIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAITGRDPVDYARPANEVNLVEWLKLMVSARRAEEVIDPSLEVKPSTRELKRALLVALRCLDPAAEKRPKMSQVVRMFEADENPFREDRRNRKGHIAGMEIETTKDLNGGPYAGKNGDPESHKPEATKSMIDNHGNLA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01924 520 Pfam Protein kinase domain 191 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01924 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Accr4g01924 520 MobiDBLite consensus disorder prediction 468 520 - -
Accr4g01924 520 FunFam Putative receptor-like protein kinase 171 264 - -
Accr4g01924 520 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Accr4g01924 520 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Accr4g01924 520 ProSiteProfiles Protein kinase domain profile. 189 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01924 520 Gene3D Transferase(Phosphotransferase) domain 1 265 477 - -
Accr4g01924 520 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01924 520 FunFam Putative receptor-like serine/threonine-protein kinase 265 475 - -
Accr4g01924 520 MobiDBLite consensus disorder prediction 468 482 - -
Accr4g01924 520 CDD STKc_IRAK 195 461 - -
Accr4g01924 520 SUPERFAMILY Protein kinase-like (PK-like) 173 462 IPR011009 -
Accr4g01924 520 Coils Coil 209 229 - -
Accr4g01924 520 PANTHER OS01G0323000 PROTEIN 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01924 Accr-Chr4 22565553 22568567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01924 19 463 Trihelix Transcription Factor Family AT1G70460 39.556 5.36e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Accr4g01924 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01924 - - tcc:18612176 820.076