Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01921 ATGGATGAACCTTTTCTCTCCAAGAAACGAGGAGTGGTTGCAGAATCATCAAGCAGGCCACCATCCCGAAGAGAACTTAACTCATCTTATATTGATCTTTTCACCAATGAAGAAATCATTCAGATAATTACCAAACCCAAGAATAGCCCTTCGTATTTGAACCTCATAGCCAACTTGAACAGAAGAAAGAAGATAGTCCACCGCTCACATTCTGCTCCCTCAGTTTTCACTGATGTCAAAAGAGATGGTCACGATTCCTCTGGCCTCAGTATTTCACAAAGAACATCACCTGCAATAGTAAGGCTATCCTTTATTGGTGTCATCTTGTATGTGGCAACTGGGGTTTTAGTGTACTTGGTAAGTGGGAGTTTCAAGGGCACATCTACTTACAAGCCTGTGGATGCTGTGTACTTCACAGTGGTAACTCTCTGTACAATAGGGTATGGTGATATTGTCCCAGACACAGCATTTACCAAAATCTTTACCTGTGGGTTCATTCTGGTGGGTTTCGGATTCATCGGCATCCTGCTGAATGGCTTGGTCACCTACGTTTGTGATAGACAAGAGGAAATGTTACTGAGTGCCATGGATGAGAATAGGTTTAATACACTAGTAAGAACATATATGATAGACAAAGAGAAAGGGAGAATGAGGATAAGAACCAAAGTGTGTCTAGCATTGGCAGTGGTTGTTTGTTGTATTGCTATAGGAACAATTTGTGCTCACTTCCTTGAGAGCTTGGATTGGCTGGACAGTTTTTATCTCTCTGTTACTTCTGTTACAACAGTGGGTTATGGGGATTATGCTTTTGCTACTGAGGGTGGAAGGTGTTTTGCATCTTTATGGCTCTTGGTGAGCACACTGGCAGTCGGCAGGGCCTTCCTGTACCTAACTGAATACAGTATTGACAAGAGAAATCGTACTATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCAGATTTAGTGGCTGCTGACCTTGACAATGATGGATCAATCAGCAAGTCTGAATTTGTCATATATAAGCTTAGGGAGATGGGGAAGATAACTGAGAATGAGATTCTACAAATTGGCAAACAATTTGACTCGTTGGACAGTGGCCAATGTGGCAAGATTACTCTTGCTGGCCTAATGGAAACTGCCTAA 1149 0.4195 MDEPFLSKKRGVVAESSSRPPSRRELNSSYIDLFTNEEIIQIITKPKNSPSYLNLIANLNRRKKIVHRSHSAPSVFTDVKRDGHDSSGLSISQRTSPAIVRLSFIGVILYVATGVLVYLVSGSFKGTSTYKPVDAVYFTVVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFIGILLNGLVTYVCDRQEEMLLSAMDENRFNTLVRTYMIDKEKGRMRIRTKVCLALAVVVCCIAIGTICAHFLESLDWLDSFYLSVTSVTTVGYGDYAFATEGGRCFASLWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLREMGKITENEILQIGKQFDSLDSGQCGKITLAGLMETA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01921 382 FunFam Two-pore potassium channel 3 206 320 - -
Accr4g01921 382 SUPERFAMILY Voltage-gated potassium channels 211 318 - -
Accr4g01921 382 PRINTS Two pore domain K+ channel signature 141 169 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr4g01921 382 PRINTS Two pore domain K+ channel signature 261 270 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr4g01921 382 SUPERFAMILY EF-hand 325 378 IPR011992 -
Accr4g01921 382 FunFam Two-pore potassium channel 2-like 98 194 - -
Accr4g01921 382 Gene3D - 193 323 - -
Accr4g01921 382 SUPERFAMILY Voltage-gated potassium channels 95 184 - -
Accr4g01921 382 Gene3D - 96 192 - -
Accr4g01921 382 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 130 356 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr4g01921 382 ProSitePatterns EF-hand calcium-binding domain. 327 339 IPR018247 -
Accr4g01921 382 MobiDBLite consensus disorder prediction 1 24 - -
Accr4g01921 382 Pfam Ion channel 107 184 IPR013099 -
Accr4g01921 382 Pfam Ion channel 229 298 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01921 Accr-Chr4 22543898 22545880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01921 66 380 Ion Channels AT4G18160 53.165 1.17e-108 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01921 K05389 - qsa:O6P43_014787 499.204