Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01909 ATGGAGGGGGATCATCAAGAACAAGATCATAAGGCGACCATGATGAATGAAACTAGGCCAAGCATTAATGATGTCCCAAAAGCTGTTTCTCCGGTCTCATTTGCAGCTGATCACGAAGATCAAACCATCAGGCGACCTCGTGGCCGGCCGGCAGGATCCAAGAACAAGCCAAAGCCGCCAATTATCGTGACAAGGGACAGTGCAAATGCCCTAAGAGCTCATGCCCTAGAAGTGACATCAGGGTGTGACATCAATGAAAGTTTGGTCAACTTTGCAAGAAGGAAGCAAAGAGGGATTTGCATATTGAGTGGAACTGGTTGTGTCACAAATGTAACACTTCGTCAGCTAGCTTCTTCAGGTGCAACTGTAACGCTCCATGGTAGGTTTGAGATTCTCTCTCTTCTCGGGTCAATTCTGCCACCGCCGGCTCCCCCGGGGATCACCGGGCTGACCATTTACCTCGCCGGGGCTCAAGGGCAGGTTGTGGGTGGAGCTGTGGTGGGAGCTCTGGTTGCTTCAGGTCCTGTGGTGATTATGGCTGCTTCGTTCATGAATGCTACTTTTGATCGTCTTCCATTAATGGAGGACGAAGAGATTGCTCAGAATCAGAATCAGCATTATCATCATCAGAATGGTCGAAGCCATAATCATCATATTCATCAACATCTTCACCACCTTGATGCTTCAGATTTGTTTGGAATGCCTCAAAACTTGCTCACTAATGGCTCAATCCCTCCTGAGATATACTCATGGAGTACTACTCCTGGCCGTAACTTCTCAAAAGCCTGA 789 0.4816 MEGDHQEQDHKATMMNETRPSINDVPKAVSPVSFAADHEDQTIRRPRGRPAGSKNKPKPPIIVTRDSANALRAHALEVTSGCDINESLVNFARRKQRGICILSGTGCVTNVTLRQLASSGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALVASGPVVIMAASFMNATFDRLPLMEDEEIAQNQNQHYHHQNGRSHNHHIHQHLHHLDASDLFGMPQNLLTNGSIPPEIYSWSTTPGRNFSKA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01909 262 ProSiteProfiles PPC domain profile profile. 68 207 IPR005175 -
Accr4g01909 262 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 184 IPR005175 -
Accr4g01909 262 FunFam AT-hook motif nuclear-localized protein 71 198 - -
Accr4g01909 262 CDD DUF296 72 154 IPR005175 -
Accr4g01909 262 MobiDBLite consensus disorder prediction 1 61 - -
Accr4g01909 262 SUPERFAMILY AF0104/ALDC/Ptd012-like 68 194 - -
Accr4g01909 262 PIRSF ESCAROLA 1 261 IPR014476 GO:0003680
Accr4g01909 262 Gene3D - 70 220 - -
Accr4g01909 262 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 217 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01909 Accr-Chr4 22195214 22196002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01909 8 251 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 67.623 6.39e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01909 - - pcin:129317250 343.199