Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01904 ATGGAAGAAGTGAATTTGTGCGTGGACAACGTTTTGCCAAATCTTGGACCCAAGAGCCACATAGATGGACCCAGTGCATTTTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGATTTTGCTTGTCATCATTTACCAAAGTTTATTGTTGAGGATGAAAGCTTCTTGAGTGATATTCAAAAGGTAGTTGCATCAGCATTTTGGCAGACAGACAATGCTTTTGTTAATGCTTGTTCGCTTTATGCTGACCATGCATCTGGCACCACTGCTCTGGCTGCTCTTGTCATTGGAAGGTTTTCAAGTGATCTTCTATCAGTGTAG 327 0.422 MEEVNLCVDNVLPNLGPKSHIDGPSAFYGVFDGHGGKHAADFACHHLPKFIVEDESFLSDIQKVVASAFWQTDNAFVNACSLYADHASGTTALAALVIGRFSSDLLSV 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01904 108 Gene3D - 2 106 IPR036457 -
Accr4g01904 108 Pfam Protein phosphatase 2C 22 99 IPR001932 -
Accr4g01904 108 ProSiteProfiles PPM-type phosphatase domain profile. 1 108 IPR001932 -
Accr4g01904 108 ProSitePatterns PPM-type phosphatase domain signature. 27 35 IPR000222 GO:0043169
Accr4g01904 108 PANTHER PROTEIN PHOSPHATASE 2C 7 98 IPR015655 GO:0004722|GO:0006470
Accr4g01904 108 SUPERFAMILY PP2C-like 22 100 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01904 Accr-Chr4 22047586 22049152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01904 1 100 PP2C-type Phosphatase Gene Family AT2G25620 64.000 1.79e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01904 K14803 - gmx:100815725 157.147