Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01872 ATGGACCTCAATTTGGGATATAGCAAGCTGTTCGTTATTCTTCTCTCAATCACTTCCACTTCACAGTTCTCACTCTCACAATTTGCTTTCGCCGACACAGGCATTCTCGTCAGTGAAGAAGTTGAAACATTGAAGGGGATAGCGAGGAAAATAGGGAAGAATGACTGGGACTTTGAAAATGAGGATCCATGCAGTGGCAAAGGGCAGTGGAATGCTTCTAATGAGAAAACACATTTTGCGAGCATTGTGGTCTGTAAATGTAACGACTCTTCTTGCCATGTTGTAAGCATATCCTTGAAGGCACAGAATCTTTCTGGTACTATCCCCCCTGAATTTTCCAAGCTAAATCATCTTAAGAAATTGACCCTGAATCTTAACATTCTCGATGGTTCTGTACCTGACGAATGGGCTAGTATGCAATTGGTTGACCTCTGGATCATGGGAAACAACTTGTCAGGTCCATTCCCCACAGTTCTCACGAACATCACAACTCTCCAGAACCTGAGTATTGAAGGAAATCGATTTTCAGGTCCCATTCCACCAGATATTGGAAAGTTGATCAAGTTAGAAAAACTCCATCTGTCCTCAAATGCATTCACTGGAGAATTGCCAGTTGAACTTTCCAAGTTGAAGAATTTGACTGAGTTGAGGATAAGTGACAATGACATCTCTGGGCAGATTCCTTATTTTATTGGTAATTGGACACTAATTAACACACTGCACATGGAGGGTTGCTCTCTTGAGGGGCCCATACCTTCAAGCATTTCAACCTTGGCAAGCTTAAGTGATTTGAGGATAACTGATCTAAAAGATGGAGCCTCTGATTTCCCATCATTAAGCAAGATGAAATCCATGAGGAAATTGATATTGAGGAACTGTATGATTAGAGGGGAGATCCCGGAAGATATTGGGAGAATGGAAAACCTGACAACCTTAGATTTGAGTTTCAATAACTTGACTGGAGAGATACCAGCTACTTTTTCCCAACTTGGAGAAGCAAAATTTGTATATCTTACTGGGAACAAGCTCGGAGGGACTATTCCTGACTGGGTCCTTGAATCAAACAACAAACAAGTTGATATTTCTAATAATAACTTTAGCTGGGATAAATCAGGTCCTGCTGAATGCTTGAAAGGGAGTGTAAACGTAGTGGAATGCTACTCTGCAGCTGTGGATACAGAAAGTAAAGTTGATCCCTGCCTGAAAAGGAACTTCCCATGTCCTGCTTCGACCAAGCAACATCATTATTCAATGCATGTTAATTGTGGTGGTAACGAAACAAATATCAATGATATAATATATGAATCTGACGTAGAAAAAAGAGGTGCTGCAGTGTTTTACTCCACCCAGAATTGGGCACTTAGCAGCACAGGGGACTTCATGGATAATCATAACAACGATGATAACTATATTCAGACCAATACTTCTACACTTCTCAATGTCTCCGCCCTCGATTCACAACTGTACACAACAGCTCGCACATCTCCTCTTTCTCTCACATATTATGGACTCTGTCTCTTAAATGGAAACTACAATGTCAAGCTTCACTTCGCAGAGATTTTGTTTTTGAATAATAGATCATATTACAGTCTTGGAAGGAGGATATTTGATGTCTACATCCAGGGGGTCTTGGTCCTGAAAGATTTCAATATAGAAAGTGAAGCTGGTGGTACAGGTAAACCTGTTGTCAAGACATTCAATACTACAGTCACCCAGAATACCTTGAAAATTCACTTTTACTGGGCTGGAAAGGGCACAACAGGCATACCAAGACGAGGATATTATGGACCTCTAGTGTCTGCTATATCTGTGGATCCTAATTTTAAACCTCCATCCGGGGATGGAAAGAGAATTTATATCGTGGTGGTTAGCTCAATAGCGGCTGTTGTAGTTCTTGTTCTTCTGGTCTTCGGCATCGTGAGGTGGAAGGGCTGGCTAGGAGGCAATGGCTCTGTGTATAAAGATCGTAGGGATTTAGATCTGCCGATGGGATTCTTTACATTTGGACAAATCAAAGCAGCAACTGAAAACTTCAATGCAGCCAACAAAATTGGGGAAGGTGGCTTTGGCTCTGTTTACAAGGGTCTACTGCCAGATGGCACAGTAATTGCAGTAAAGCAGCTCTCCTCAAAATCTACTCAAGGAACCCGTGAATTTGTGAACGAGTTAGGAATGATATCTGGCCTTCAACATCCCAATCTTGTTAAGCTTTATGGATGCTGTGTGGAAGGAGACCAGTTAATGTTGATATATGAGTATATGGAAAACAATTGTCTATCTCGTGTTCTTTTTGAGAAAAATCCAGCCCGCCAAGTGATATTGGACTGGGCAACCAGGAGGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTTTCTCCACGAAGAGTGCGTGATTAAAATCATACACAGGGATATAAAAACAAGTAATGTGTTGCTTGACAAGGATTTTAATGCGAAGATTTCAGACTTCGGTTTTGCAAAACTCAATGTAGATGAAAATACCCATGTTAGCACTCGCGTTGCAGGAACTATTGGCTATATGGCTCCTGAGTATGCGTTGCGTGGTTATTTAACTGATAAAGCTGACATTTATAGCTTTGGGGTAGTTGCATTGGAAATTGTCAGTGGAAGGAGTAATGCAAGTTTCAGACCCAGCGAGTTCCTCCTTGATTGGGCCATTGTTTTGCAAGGGAAAGGAAGGCTAATAGAGCTGGTGGATCCAGAATTGGGATCAGAATACTCAAGGGAGGAGGCCATGGTAATACTAAACGTGGCACTCTTGTGTACCAATGCATCTCCTGCACTTAGGCCAACAATGTCTCAAGTTCTGAGCATGCTTGAAGGTAGAAGTAACACGCAGGAACTACTTCCTGATGATCCAGGACATGATGGAGCAGTTAATTTCAAATATGAGGCCTTAAGAAGTCATTTCTGTGAGAATCTAAGCCCAAGAGAAAGCATGTCAATTCATGGTCAATGTCCTGGTTCCTCTTGTTCAGCCTTTGAAGTAGAAGAGAAGCACCTCCTTGGAAATGTTAGCTCAGACTCAACTACTAAAGCAGACTAG 3069 0.4174 MDLNLGYSKLFVILLSITSTSQFSLSQFAFADTGILVSEEVETLKGIARKIGKNDWDFENEDPCSGKGQWNASNEKTHFASIVVCKCNDSSCHVVSISLKAQNLSGTIPPEFSKLNHLKKLTLNLNILDGSVPDEWASMQLVDLWIMGNNLSGPFPTVLTNITTLQNLSIEGNRFSGPIPPDIGKLIKLEKLHLSSNAFTGELPVELSKLKNLTELRISDNDISGQIPYFIGNWTLINTLHMEGCSLEGPIPSSISTLASLSDLRITDLKDGASDFPSLSKMKSMRKLILRNCMIRGEIPEDIGRMENLTTLDLSFNNLTGEIPATFSQLGEAKFVYLTGNKLGGTIPDWVLESNNKQVDISNNNFSWDKSGPAECLKGSVNVVECYSAAVDTESKVDPCLKRNFPCPASTKQHHYSMHVNCGGNETNINDIIYESDVEKRGAAVFYSTQNWALSSTGDFMDNHNNDDNYIQTNTSTLLNVSALDSQLYTTARTSPLSLTYYGLCLLNGNYNVKLHFAEILFLNNRSYYSLGRRIFDVYIQGVLVLKDFNIESEAGGTGKPVVKTFNTTVTQNTLKIHFYWAGKGTTGIPRRGYYGPLVSAISVDPNFKPPSGDGKRIYIVVVSSIAAVVVLVLLVFGIVRWKGWLGGNGSVYKDRRDLDLPMGFFTFGQIKAATENFNAANKIGEGGFGSVYKGLLPDGTVIAVKQLSSKSTQGTREFVNELGMISGLQHPNLVKLYGCCVEGDQLMLIYEYMENNCLSRVLFEKNPARQVILDWATRRKICLGIARALAFLHEECVIKIIHRDIKTSNVLLDKDFNAKISDFGFAKLNVDENTHVSTRVAGTIGYMAPEYALRGYLTDKADIYSFGVVALEIVSGRSNASFRPSEFLLDWAIVLQGKGRLIELVDPELGSEYSREEAMVILNVALLCTNASPALRPTMSQVLSMLEGRSNTQELLPDDPGHDGAVNFKYEALRSHFCENLSPRESMSIHGQCPGSSCSAFEVEEKHLLGNVSSDSTTKAD 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01872 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Accr4g01872 1022 Pfam Protein kinase domain 680 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01872 1022 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 415 607 - -
Accr4g01872 1022 SMART serkin_6 678 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01872 1022 Pfam Malectin domain 417 602 IPR021720 -
Accr4g01872 1022 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 648 753 - -
Accr4g01872 1022 SUPERFAMILY Protein kinase-like (PK-like) 661 953 IPR011009 -
Accr4g01872 1022 Gene3D Ribonuclease Inhibitor 204 269 IPR032675 -
Accr4g01872 1022 Gene3D Ribonuclease Inhibitor 270 371 IPR032675 -
Accr4g01872 1022 Gene3D Ribonuclease Inhibitor 52 203 IPR032675 -
Accr4g01872 1022 FunFam Putative LRR receptor-like serine/threonine-protein kinase 754 958 - -
Accr4g01872 1022 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 270 - -
Accr4g01872 1022 ProSiteProfiles Protein kinase domain profile. 678 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01872 1022 SUPERFAMILY L domain-like 83 367 - -
Accr4g01872 1022 Gene3D Phosphorylase Kinase; domain 1 649 753 - -
Accr4g01872 1022 ProSitePatterns Protein kinases ATP-binding region signature. 684 706 IPR017441 GO:0005524
Accr4g01872 1022 CDD STKc_IRAK 684 949 - -
Accr4g01872 1022 Gene3D - 413 606 - -
Accr4g01872 1022 ProSiteProfiles Leucine-rich repeat profile. 308 330 IPR001611 GO:0005515
Accr4g01872 1022 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 43 980 - -
Accr4g01872 1022 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 42 203 - -
Accr4g01872 1022 Gene3D Transferase(Phosphotransferase) domain 1 754 960 - -
Accr4g01872 1022 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 277 369 - -
Accr4g01872 1022 Pfam Leucine Rich Repeat 308 330 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01872 Accr-Chr4 21032778 21046483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01872 31 1000 Receptor kinase-like Gene Family AT1G53440 49.748 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr4g01872 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01872 - - gmx:100784864 1325.84