Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01871 ATGGACCTCAATTTGGGATATAGCAAGCTGTTCGTTATTCTTCTCTCAATCACTTCCACTTCACAGTTCTCACTCTCACAATTTGCTTTCGCCGACACAGGCATTCTCGTCAGTGAAGAAGTTGAAACATTGAAGGGGATAGCGAGGAAAATAGGGAAGAATGACTGGGACTTTGAAAATGAGGATCCATGCAGTGGCAAAGGGCAGTGGAATGCTTCTAATGAGAAAACACATTTTGCGAGCATTGTGGTCTGTAAATGTAACGACTCTTCTTGCCATGTTGTAAGCATATCCTTGAAGGCACAGAATCTTTCTGGTACTATCCCCCCTGAATTTTCCAAGCTAAATCATCTTAAGAAATTGACCCTGAATCTTAACATTCTCGATGGTTCTGTACCTGACGAATGGGCTAGTATGCAATTGGTTGACCTCTGGATCATGGGAAACAACTTGTCAGGTCCATTCCCCACAGTTCTCACGAACATCACAACTCTCCAGAACCTGAGTATTGAAGGAAATCGATTTTCAGGTCCCATTCCACCAGATATTGGAAAGTTGATCAAGTTAGAAAAACTCCATCTGTCCTCAAATGCATTCACTGGAGAATTGCCAGTTGAACTTTCCAAGTTGAAGAATTTGACTGAGTTGAGGATAAGTGACAATGACATCTCTGGGCAGATTCCTTATTTTATTGGTAATTGGACACTAATTAACACACTGCACATGGAGGGTTGCTCTCTTGAGGGGCCCATACCTTCAAGCATTTCAACCTTGGCAAGCTTAAGTGATTTGAGGATAACTGATCTAAAAGATGGAGCCTCTGATTTCCCATCATTAAGCAAGATGAAATCCATGAGGAAATTGATATTGAGGAACTGTATGATTAGAGGGGAGATCCCGGAAGATATTGGGAGAATGGAAAACCTGACAACCTTAGATTTGAGTTTCAATAACTTGACTGGAGAGATACCAGCTACTTTTTCCCAACTTGGAGAAGCAAAATTTGTATATCTTACTGGGAACAAGCTCGGAGGGACTATTCCTGACTGGGTCCTTGAATCAAACAACAAACAAGTTGATATTTCTAATAATAACTTTAGCTGGGATAAATCAGGTCCTGCTGAATGCTTGAAAGGGAGTGTAAACGTAGTGGAATGCTACTCTGCAGCTGTGGATACAGAGTCAGAAAGTAAAGTTGATCCCTGCCTGAAAAGGAACTTCCCATGTCCTGCTTCGACCAAGCAACATCATTATTCAATGCATGTTAATTGTGGTGGTAACGAAACAAATATCAATGATATAATATATGAATCTGACGTAGAAAAAAGAGGTGCTGCAGTGTTTTACTCCACCCAGAATTGGGCACTTAGCAGCACAGGGGACTTCATGGATAATCATAACAACGATGATAACTATATTCAGACCAATACTTCTACACTTCTCAATGTCTCCGCCCTCGATTCACAACTGTACACAACAGCTCGCACATCTCCTCTTTCTCTCACATATTATGGACTCTGTCTCTTAAATGGAAACTACAATGTCAAGCTTCACTTCGCAGAGATTTTGTTTTTGAATAATAGATCATATTACAGTCTTGGAAGGAGGATATTTGATGTCTACATCCAGGGGGTCTTGGTCCTGAAAGATTTCAATATAGAAAGTGAAGCTGGTGGTACAGGTAAACCTGTTGTCAAGACATTCAATACTACAGTCACCCAGAATACCTTGAAAATTCACTTTTACTGGGCTGGAAAGGGCACAACAGGCATACCAAGACGAGGATATTATGGACCTCTAGTGTCTGCTATATCTGTGGATCCTAATTTTAAACCTCCATCCGGGGATGGAAAGAGAATTTATATCGTGGTGGTTAGCTCAATAGCGGCTGTTGTAGTTCTTGTTCTTCTGGTCTTCGGCATCGTGAGGTGGAAGGGCTGGCTAGGAGGCAATGGCTCTGTGTATAAAGATCGTAGGGATTTAGATCTGCCGATGGGATTCTTTACATTTGGACAAATCAAAGCAGCAACTGAAAACTTCAATGCAGCCAACAAAATTGGGGAAGGTGGCTTTGGCTCTGTTTACAAGGGTCTACTGCCAGATGGCACAGTAATTGCAGTAAAGCAGCTCTCCTCAAAATCTACTCAAGGAACCCGTGAATTTGTGAACGAGTTAGGAATGATATCTGGCCTTCAACATCCCAATCTTGTTAAGCTTTATGGATGCTGTGTGGAAGGAGACCAGTTAATGTTGATATATGAGTATATGGAAAACAATTGTCTATCTCGTGTTCTTTTTGAGAAAAATCCAGCCCGCCAAGTGATATTGGACTGGGCAACCAGGAGGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTTTCTCCACGAAGAGTGCGTGATTAAAATCATACACAGGGATATAAAAACAAGTAATGTGTTGCTTGACAAGGATTTTAATGCGAAGATTTCAGACTTCGGTTTTGCAAAACTCAATGTAGATGAAAATACCCATGTTAGCACTCGCGTTGCAGGAACTATTGGCTATATGGCTCCTGAGTATGCGTTGCGTGGTTATTTAACTGATAAAGCTGACATTTATAGCTTTGGGGTAGTTGCATTGGAAATTGTCAGTGGAAGGAGTAATGCAAGTTTCAGACCCAGCGAGTTCCTCCTTGATTGGGCCATTGTTTTGCAAGGGAAAGGAAGGCTAATAGAGCTGGTGGATCCAGAATTGGGATCAGAATACTCAAGGGAGGAGGCCATGGTAATACTAAACGTGGCACTCTTGTGTACCAATGCATCTCCTGCACTTAGGCCAACAATGTCTCAAGTTCTGAGCATGCTTGAAGGTAGAAGTAACACGCAGGAACTACTTCCTGATGATCCAGGACATGATGGAGCAGTTAATTTCAAATATGAGGCCTTAAGAAGTCATTTCTGTGAGAATCTAAGCCCAAGAGAAAGCATGTCAATTCATGGTCAATGTCCTGGTTCCTCTTGTTCAGCCTTTGAAGTAGAAGAGAAGCACCTCCTTGGAAATGTTAGCTCAGACTCAACTACTAAAGCAGACTAG 3075 0.4176 MDLNLGYSKLFVILLSITSTSQFSLSQFAFADTGILVSEEVETLKGIARKIGKNDWDFENEDPCSGKGQWNASNEKTHFASIVVCKCNDSSCHVVSISLKAQNLSGTIPPEFSKLNHLKKLTLNLNILDGSVPDEWASMQLVDLWIMGNNLSGPFPTVLTNITTLQNLSIEGNRFSGPIPPDIGKLIKLEKLHLSSNAFTGELPVELSKLKNLTELRISDNDISGQIPYFIGNWTLINTLHMEGCSLEGPIPSSISTLASLSDLRITDLKDGASDFPSLSKMKSMRKLILRNCMIRGEIPEDIGRMENLTTLDLSFNNLTGEIPATFSQLGEAKFVYLTGNKLGGTIPDWVLESNNKQVDISNNNFSWDKSGPAECLKGSVNVVECYSAAVDTESESKVDPCLKRNFPCPASTKQHHYSMHVNCGGNETNINDIIYESDVEKRGAAVFYSTQNWALSSTGDFMDNHNNDDNYIQTNTSTLLNVSALDSQLYTTARTSPLSLTYYGLCLLNGNYNVKLHFAEILFLNNRSYYSLGRRIFDVYIQGVLVLKDFNIESEAGGTGKPVVKTFNTTVTQNTLKIHFYWAGKGTTGIPRRGYYGPLVSAISVDPNFKPPSGDGKRIYIVVVSSIAAVVVLVLLVFGIVRWKGWLGGNGSVYKDRRDLDLPMGFFTFGQIKAATENFNAANKIGEGGFGSVYKGLLPDGTVIAVKQLSSKSTQGTREFVNELGMISGLQHPNLVKLYGCCVEGDQLMLIYEYMENNCLSRVLFEKNPARQVILDWATRRKICLGIARALAFLHEECVIKIIHRDIKTSNVLLDKDFNAKISDFGFAKLNVDENTHVSTRVAGTIGYMAPEYALRGYLTDKADIYSFGVVALEIVSGRSNASFRPSEFLLDWAIVLQGKGRLIELVDPELGSEYSREEAMVILNVALLCTNASPALRPTMSQVLSMLEGRSNTQELLPDDPGHDGAVNFKYEALRSHFCENLSPRESMSIHGQCPGSSCSAFEVEEKHLLGNVSSDSTTKAD 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01871 1024 SUPERFAMILY Protein kinase-like (PK-like) 663 955 IPR011009 -
Accr4g01871 1024 FunFam Putative LRR receptor-like serine/threonine-protein kinase 756 960 - -
Accr4g01871 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Accr4g01871 1024 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 270 - -
Accr4g01871 1024 Gene3D Phosphorylase Kinase; domain 1 651 755 - -
Accr4g01871 1024 ProSiteProfiles Protein kinase domain profile. 680 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01871 1024 Gene3D - 415 608 - -
Accr4g01871 1024 ProSiteProfiles Leucine-rich repeat profile. 308 330 IPR001611 GO:0005515
Accr4g01871 1024 Pfam Malectin domain 419 604 IPR021720 -
Accr4g01871 1024 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 42 203 - -
Accr4g01871 1024 SUPERFAMILY L domain-like 83 367 - -
Accr4g01871 1024 SMART serkin_6 680 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01871 1024 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 417 609 - -
Accr4g01871 1024 Pfam Protein kinase domain 682 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01871 1024 Gene3D Ribonuclease Inhibitor 204 269 IPR032675 -
Accr4g01871 1024 Gene3D Ribonuclease Inhibitor 270 371 IPR032675 -
Accr4g01871 1024 Gene3D Ribonuclease Inhibitor 52 203 IPR032675 -
Accr4g01871 1024 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 43 982 - -
Accr4g01871 1024 CDD STKc_IRAK 686 951 - -
Accr4g01871 1024 Gene3D Transferase(Phosphotransferase) domain 1 756 962 - -
Accr4g01871 1024 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 277 369 - -
Accr4g01871 1024 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 650 755 - -
Accr4g01871 1024 Pfam Leucine Rich Repeat 308 330 IPR001611 GO:0005515
Accr4g01871 1024 ProSitePatterns Protein kinases ATP-binding region signature. 686 708 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01871 Accr-Chr4 21032778 21046483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01871 31 1002 Receptor kinase-like Gene Family AT1G53440 49.547 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr4g01871 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01871 - - gmx:100784864 1320.84