Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01858 ATGGATGGGGATCAGGAAACAAGTGTGGCTCCATCCTCATTAGTCACTGCAAAGAAGAAGAAGAAAGGTTCCATTCGATCAATTTTCATGCACGTCGATACAGTTGATTTGTTCCTCATGGTGCTCGGCGTCTTTGCGTCCCTCGGCCATAGTTTCACCACCCCTCTTGTCCTCTTGATCAGTAGCCGCTTGATGAACAGTATTGGCTCTAGTTCTACCGTCGGTCCAACTTCTTTTACCCATAGCATCAACAAGAATGCGGTGAACATGCTGTATTTAGCTGCTGGTTCCTTCTTCGCTTGCTTTCTTAGGGAAAGACAAGCTGCTAGAATGAGAGCCAGGTATTTGAAGGCGTTGCTCAAACAAGTGTTGCTTACTTTGATCTTCACGTCACAAGCACGTCGAAGGTCATCTCCAGCATCTACAACGACACCCTTGTAA 441 0.4649 MDGDQETSVAPSSLVTAKKKKKGSIRSIFMHVDTVDLFLMVLGVFASLGHSFTTPLVLLISSRLMNSIGSSSTVGPTSFTHSINKNAVNMLYLAAGSFFACFLRERQAARMRARYLKALLKQVLLTLIFTSQARRRSSPASTTTPL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01858 146 Gene3D ABC transporter type 1, transmembrane domain 18 125 IPR036640 GO:0005524|GO:0016020
Accr4g01858 146 SUPERFAMILY ABC transporter transmembrane region 28 123 IPR036640 GO:0005524|GO:0016020
Accr4g01858 146 PANTHER ABC TRANSPORTER B FAMILY 16 124 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01858 Accr-Chr4 20434079 20434741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01858 1 122 Calmodulin-binding Proteins AT2G36910 30.370 1.02e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01858 K05658 - lja:Lj2g3v1022430.1 125.176