Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01857 ATGTTGTTGGTGTGCTCGGATGTGCATTTTTTTGTGGTGGGATTGTTTTTAATAAGAAGGAGCAGATTTTCAACAAGAAACTGCTACCGTGAATGTAGGATTGTTACTGGTGGCAGTCATGGGCCTACTTTTACTGGCTGTTCTTCACTACACACACACCGAGTCCATTTTGGGAGCTCAGAGTTGGCCCTTTCAAGATTTAGCAGCTGCATCATGCTTGTGGCTTATGTTGCATACCTATTTTTCCAATTAAATAGCCAAAGAAGTCTATATCTCTCTTTGAATGAGGAGGAGTGGAATCACAGAAACTGCATGGAAGACGATGGATCTCCTAATATCTCTAAATGGGAATCAGTAGTCTGGCTTGCAATTATGACTGCTTTGATATCAGTTCTGTCAGAATATTTAATTGGTGCTATAGAGGGAGCATCAACTTCATGGAAGATGCCAGTGTCTTTTGTCAGTGTAATATTGCTTCCCTTGGTGGGAAATGTTGCCGGGCATGCCAGCACTGTCATGTTTGCCATGAAAGATAAGCTTGGAAGCTTTCATCAATTCTTTTGTTTTCCTGAAAAAAAAAAATCCCATTATTTCACATTAATGGTTTCTATCACCGACAGGATATTACCTTAG 633 0.4028 MLLVCSDVHFFVVGLFLIRRSRFSTRNCYRECRIVTGGSHGPTFTGCSSLHTHRVHFGSSELALSRFSSCIMLVAYVAYLFFQLNSQRSLYLSLNEEEWNHRNCMEDDGSPNISKWESVVWLAIMTALISVLSEYLIGAIEGASTSWKMPVSFVSVILLPLVGNVAGHASTVMFAMKDKLGSFHQFFCFPEKKKSHYFTLMVSITDRILP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01857 210 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 52 180 IPR004713 GO:0006812|GO:0008324|GO:0016020
Accr4g01857 210 Pfam Sodium/calcium exchanger protein 118 179 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01857 Accr-Chr4 20391320 20392779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01857 1 180 Antiporters AT1G55730 53.591 2.47e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01857 K07300 - gmx:100799276 192.2