Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01856 ATGGAAGTGATTGTCAGTATCGGGGAGAAGATTTCAGAATGCTTGGCAGGGCCAATTTTGCGCCGTGCTCGTTATTTGTTCTGCTTCAAGCAATTTGTTAGAGATGTTGAGAAAGCAAAACAAGAGTTAGAGGGGAAACTAGCAGATATGAACAAGCGTAAAGAAGAAGCTGATAGAAAAACTGAAGAAATAATGCCATCCGTGAAAAAGTGGTTGGGTGATGTGAATGCTATCTTTGGGGATGTGCAAAAGCTACAACAAGAGCTTGAAGAACGAGGAAACAAGTGTTTCAATGTGCCACTTAGATATTCTTTAGCCAAACAGATGGAAGATAAGGCTAAGCAGATGATGGAGCTCAAAAACAATTCCAGCTTTGAGCCATTTTCCCAGCTAATCCAACTTCCTGGCATCACCTACTTCTCTTCCGAACAGTTTGTGGATTTCAACTCAAGAAAATCAGCTTACAATCGTCTTTTAGAGGCAATTAAAGATGGCAAGAACAAGATGGTGGGACTATATGGAATGGGCGGCTCAGGCAAAACCACCTTGGCAAAACAAGTAGGTAAGAAAGTGAATGAGCTCAAGCTTTTTGAAAAGGTTGTCATCGTAGTCGTTTCAAAATCCCCAAATGTTCACAACATTCAACAAGAAATAGCAGAGCAAATAAGCTTGAAATTCGAAGAGACTTCTCGACTTACTAGGGCACAAAGGCTCTCTTTGGGATTAAAAAATAAGAAGATTCTTATAATCTTGGATGATGTGTGGAGCAAACTAAGCTTTGAAGATGTTGGCATTCCGCTAAACGAAGGTTGTTGTGTCTTGTTGACCACTCGCCTTCGTGATGTATGTCTTGATATGGATTGTGAGAGTATAATTGAATTACCTATTTTAACAGAAGAAGATGCATGGGCTTTGTTCAATATGCATGCTAACCCAACCACTATCTCAAAGAATGAGTTTGATAGCATTGGGAGGAAGATTGTTGATGAGTGTAAAGGTTTGCCTATAGCAATTGTAACAGTGGGAAGCACATTAAAAAGAAGAGGTGTTCGAGTGTGGGAATCAACACTACAGAAGCTACAACGTCCCCTGCCATTGGATGTTAAAGATGATTTCGAGACCCTTTATGCAATTCTCCAAGTAAGTTATGATAATTTACGAAGCCTGCTAGCCCAGTCACTCTTCTTATTGTGTTCTATGTTTCCTGAAGATCATGAAATCCATATAGAAGATTTAATTCGTTTTGGCAAAGGGACTTTGAAGCTTGATGACAATATTTATACAATGGAGGATGCAAGGAAAGAGATTTTAATAACTATTGAGAAATTGCTAGATTCTTCTTTATTAATGCATACAGATAAGCAAGCATGTGTGAAAATGCATGACTTAGTTCGAGATGTAGCTTTGTGGGTTGCAAAGAAGCAAGGTCAAGCAATTTTGGTGAACAGAGATGTGGTTTCAAGGATGCTGGTCAAAAATGAAACTTTGAAAGAGACAAAGGCAATATCATTATGGAACTTGGAAAACAATTTTAAGCTCTCTAATCAATTGTATTGTCCAACTCTTGAGATTTTGTTACTTCATTCAGCTGGAGGGTTCTTTGAAGATCTCGGAGGGATTGAATCACTCAAAGTCTTGGCCGCTTTAACATTTAGCTTTCAATGGATACATCATATTTGGACACCGATTCAGTGGTCAATGCCGCAATCAATTGTGTCATCATTAATGAATCTTCATGCCTTATGCGTTAGAGGAATTGCATTGGGTGACATCTCTTTTCTATGTCAACTCAAAATATTAGAAATTCTTGACTTGCGTAGTTCTGAATTTGATGAATTACCTGCTGCAATTGTACATATGAAAAAGTTGAAGCTTTTAGATGTGTTTGCGTGTAGAATTAAGAAAAGTCCTTTAGAAGTTATCGAAAAATGTGAGCAACTTGACGAGTTATACTTTTGGGATGGGAAGTCTGTTATCACAGAAAATTTCTCTCTTTCAAGATTGAAGAGGTACGCTATCTGTGACTCCACATTTGCATCTCTTGATCCATTACTAATGGATCCGCCATTTCTAAAATATTTTGATGATTGCATTGAAGCATTGAGATGTTTATGTATACAAGGCTTCAAAGTCTCTACTTTAAATTCATCGATGAAAGATCTCATTTTTAGAGCGAATTGCCTTTGGCTAAAGAATTGTAGGTGGGATCATAATGATATAAATTCTGAGATAAAGCACTTAGGGGTTTCACATTGTCCAGATAAAAGATTCATAGTTGATAACCTTGGTACCAACTTTCCTCAAGCAAGACAAGTCTTCTCCCACCTGATTACTTTAAGATTGACTCAAATGGATAGCCTTGAACAAGTGTTCCAAGATTCATCTATTAGGTGTTCTCTCCCGAAGTTACAAGAGCTACACGTGGCAGTGTGTCCCAAATTGACAACTATACTTACCCATGCCACTGTTACAAGCATACCGGAGCTAAGAAAACTTCAGATTTATAGCTGCGAAAATGTGAAATGGTTATTCTCTTATTCTTTGACTTCTCATTGTCCTTCACTAGTGGAATTGCGAATATGGGATTGTCTTGAACTGGAGAGTCTCATTGGTGAAGAAGTAGCACTCGGGGATCGTCTTCTTCATGATATGCAAGATAATCCATGCGGGAATGAGGCTGAGAGAGCATTTCTTGTGGTTACTGCAAAAAGCTTCAAGCAATTGCAAAATCATGAAGCCTTGATGACCCTTTTCCTAAGATTGAAGCATGTAGAAATTAAACGCAGTGGAAGAAGAATGAAAGTTATGTTTGAGGTGCAAGTAAGAGGAACACTAGAAGGTGAAGAGTCCATTGAAGAACCTTTGAAGCTGAATTTGTGTTCTTTATACTTAGATGATCTAGCAGAGTTGGAATATATTTGGAAGGGTCCCCCACAAAGTGTGAGCCTCTATAGACTTGAAGATGTTTCATTGTCGAAGTGCCCAAAGTCAAAGAATATCTTCACTTTTGCTATTGTTACAAGTCTTCCAGAGTTAAGGACACTAGAAGTAGTTAGATGCAAGGAATGGGAGGGAATATTTTGTGAAGAATCACTCAAAATCCTTTCTTCTTCTTCTAATGTTTGCTTCCCCAAACTTCAAAATATTAGTATAAGTGGAAGCAACAAAGTGAAAAGGTTGTTCACATATTCTCTGGCTTTTCATTGTCCTTTACTTGAGGGAATAACTATAAGGGATTGCTCTGAACTTGAGAGTCTTGTTGAAGAAGCATCACATGAGGATATTCTACTAGGCTTCTCAAACTAA 3306 0.3808 MEVIVSIGEKISECLAGPILRRARYLFCFKQFVRDVEKAKQELEGKLADMNKRKEEADRKTEEIMPSVKKWLGDVNAIFGDVQKLQQELEERGNKCFNVPLRYSLAKQMEDKAKQMMELKNNSSFEPFSQLIQLPGITYFSSEQFVDFNSRKSAYNRLLEAIKDGKNKMVGLYGMGGSGKTTLAKQVGKKVNELKLFEKVVIVVVSKSPNVHNIQQEIAEQISLKFEETSRLTRAQRLSLGLKNKKILIILDDVWSKLSFEDVGIPLNEGCCVLLTTRLRDVCLDMDCESIIELPILTEEDAWALFNMHANPTTISKNEFDSIGRKIVDECKGLPIAIVTVGSTLKRRGVRVWESTLQKLQRPLPLDVKDDFETLYAILQVSYDNLRSLLAQSLFLLCSMFPEDHEIHIEDLIRFGKGTLKLDDNIYTMEDARKEILITIEKLLDSSLLMHTDKQACVKMHDLVRDVALWVAKKQGQAILVNRDVVSRMLVKNETLKETKAISLWNLENNFKLSNQLYCPTLEILLLHSAGGFFEDLGGIESLKVLAALTFSFQWIHHIWTPIQWSMPQSIVSSLMNLHALCVRGIALGDISFLCQLKILEILDLRSSEFDELPAAIVHMKKLKLLDVFACRIKKSPLEVIEKCEQLDELYFWDGKSVITENFSLSRLKRYAICDSTFASLDPLLMDPPFLKYFDDCIEALRCLCIQGFKVSTLNSSMKDLIFRANCLWLKNCRWDHNDINSEIKHLGVSHCPDKRFIVDNLGTNFPQARQVFSHLITLRLTQMDSLEQVFQDSSIRCSLPKLQELHVAVCPKLTTILTHATVTSIPELRKLQIYSCENVKWLFSYSLTSHCPSLVELRIWDCLELESLIGEEVALGDRLLHDMQDNPCGNEAERAFLVVTAKSFKQLQNHEALMTLFLRLKHVEIKRSGRRMKVMFEVQVRGTLEGEESIEEPLKLNLCSLYLDDLAELEYIWKGPPQSVSLYRLEDVSLSKCPKSKNIFTFAIVTSLPELRTLEVVRCKEWEGIFCEESLKILSSSSNVCFPKLQNISISGSNKVKRLFTYSLAFHCPLLEGITIRDCSELESLVEEASHEDILLGFSN 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01856 1101 PRINTS Disease resistance protein signature 241 255 - -
Accr4g01856 1101 PRINTS Disease resistance protein signature 169 184 - -
Accr4g01856 1101 PRINTS Disease resistance protein signature 331 345 - -
Accr4g01856 1101 PRINTS Disease resistance protein signature 618 634 - -
Accr4g01856 1101 SMART AAA_5 166 297 IPR003593 GO:0016887
Accr4g01856 1101 SUPERFAMILY RNI-like 975 1084 - -
Accr4g01856 1101 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 911 1086 - -
Accr4g01856 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 398 IPR027417 -
Accr4g01856 1101 Gene3D Ribonuclease Inhibitor 470 679 IPR032675 -
Accr4g01856 1101 Gene3D Ribonuclease Inhibitor 695 880 IPR032675 -
Accr4g01856 1101 Pfam NB-ARC domain 156 385 IPR002182 GO:0043531
Accr4g01856 1101 FunFam Probable disease resistance protein At1g61300 139 290 - -
Accr4g01856 1101 Gene3D - 139 293 IPR027417 -
Accr4g01856 1101 Gene3D - 296 382 IPR042197 -
Accr4g01856 1101 SUPERFAMILY L domain-like 459 874 - -
Accr4g01856 1101 Gene3D Ribonuclease Inhibitor 908 1096 IPR032675 -
Accr4g01856 1101 Coils Coil 33 60 - -
Accr4g01856 1101 Gene3D - 383 469 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01856 Accr-Chr4 20380759 20385660 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01856 151 475 WRKY Transcription Factor Family AT5G45050 24.629 1.07e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01856 - - pcin:129306241 1266.14