Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01813 ATGAAGATAGAAGAAGCAGAAACATTGGCGATGAGGTTTAAGGAGATTGTTTCTTTGTGTATTGGAACCTCCATGAGAATTCTCGAACGACTAGTTTTTGCTGCATTCACCTGCATTCTCGCTCTAGGAGGGTCAATAGTGGGGGCAATAGTAGGAGGGATGAAGGGTCAGAGATCAGAGGCTGGGATACTTGATGGAGCTGGCAAAGGAGCAGTTTCAGGAGCCATTGCTGCTCTCGAATTACTTGATTTTGTTGCTGATGAAGATCATCAGCCTATGTCCAAGGTTGCCCTATTAACTAGCTTGTTCAATGGGAAAGTCCTAATGGAATGTGTATATTCAGGCTATCAATGGCATATTGGGACTCCAGAAACAATCTACAGAGAAGTATCACATATTTATGATATGAAAGGAATACCAGGACTGTCCCAGAAATTGATTCAAGGCCTGCCTTTTCATCAATTCAGCTCCACAAAAATGCCAACTTTATACAATGAATCTTGCTGCTCCATTTGCTTCCAGGAGTTTGAAGATGGAGATTTGATAAGGATGCTTCCAAAATGTGACCATGTTTTTCACTTTCACTGTATAGATAAATGGCTCATCCAACAAGGATCTTGCCCTATGTGTAGAACTCATGTTCTTGAGGATCATTTTGATGTTTTTTTTGGGTAA 675 0.4089 MKIEEAETLAMRFKEIVSLCIGTSMRILERLVFAAFTCILALGGSIVGAIVGGMKGQRSEAGILDGAGKGAVSGAIAALELLDFVADEDHQPMSKVALLTSLFNGKVLMECVYSGYQWHIGTPETIYREVSHIYDMKGIPGLSQKLIQGLPFHQFSSTKMPTLYNESCCSICFQEFEDGDLIRMLPKCDHVFHFHCIDKWLIQQGSCPMCRTHVLEDHFDVFFG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01813 224 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 20 214 IPR044523 -
Accr4g01813 224 Pfam Ring finger domain 169 211 IPR001841 -
Accr4g01813 224 SMART ring_2 169 210 IPR001841 -
Accr4g01813 224 SUPERFAMILY RING/U-box 163 217 - -
Accr4g01813 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 215 IPR013083 -
Accr4g01813 224 CDD RING-H2_EL5-like 168 211 - -
Accr4g01813 224 ProSiteProfiles Zinc finger RING-type profile. 169 211 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01813 Accr-Chr4 19611097 19613292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01813 27 214 C3H Transcription Factor Family AT5G66070 33.668 1.50e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01813 - K19041 gmx:100305612 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01813 4 19611097 19613292 Accr4g01813 4 19611097 19613292 ECH