Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01812 ATGGGTCAGTGTTTGGGTAAAGGCCAAGGTTCCAACCGCGATTATAATGGATACAGATCAGTTGGGGAAACCGGAGCAGCGCAGAATTACAAAGCCCATGAACCCTATTCGAATCAACCGAAACCCACTTCTCATCAGTTACCAGAAAAACCCTCTTCTAGGGCTCCGATAAATCCCAATAAACCCGGCCAGAATACGATTCTGGGGAAGCCATTCGAAGATGTGAAGCAAATTTACAGGATTGGGAAGGAACTGGGACGGGGTCAATTTGGTGTGACCTATCTCTGTATTGAGATTTCAACTGGCAGACCATACGCTTGCAAGTCAATCTCGAAGAGGAAGCTTACAAGCAGAGCTGATAAGGAGGATATGAAGAGGGAGATTCATATCATGCAGCATATGAGTGGGCAGCCTAATATTGTGGAATTCAAAGGTGCTTATGAAGATAGTCATTCTGTTCATCTTGTGATGGAGCTGTGTGCTGGCGGTGAGCTCTTTGATCGGATTATCGCCAAGGGACATTACAGTGAAAGAGCTGCTGCGTCTATATGTAGACAGATTGTTAATGTTGTTCATATCTGTCACTTTATGGGTGTGATGCATAGAGATCTCAAGCCTGAGAATTTCTTGTTGTCCAGTAAGGATGAAAAGGCACTTCTCAAAGCCACAGATTTCGGTTTGTCTGTATTCATTGAGGAAGGAAAGGTTTATCGGGATATAGTTGGGAGTGCTTATTATGTTGCTCCTGAGGTCCTACGGCGAAGATATGGGAAGGAAATCGACATTTGGAGCGCAGGAGTGATATTGTATATCTTACTCAGTGGTGTACCTCCTTTTTGGGCTGAGACTGAAAAGGGAATATTTGATGCCGTTTTGGAAGGTCATATTGATTTTGAAAGTCAACCATGGCCAAACATATCGGACAGTGCCAAGGATCTTGTTCGTAGGATGCTGACCCAAGACCCAAAAAAGCGCATTACTTCTGCTCAGGTTCTTGAGCACCCATGGATTAGAGAAGATGGCAATGCATCTGACAAGCCGATAGATAGTGCAGTCCTTTCCAGAATGAAGCAATTCAGAGTAATGAATAAGCTAAAGAAACTTGCCCTGAAGGTCATTGCAGAAAATCTCTCTGAAGAAGAGATCAAAGGGTTGAGGGCAATGTTTACGAATATGGACACCGACAACAGCGGTACAATCACCTATGAGGAACTAAAGGAGGGATTGCAGAGACTTGGCTCCAAGCTCACAGAGGCTGAAGTGAAGCAGCTTATGGAAGCTGCTGATGTAGATGGAAATGGTACCATCGACTACATAGAGTTCATCACTGCCACAATGCATAGACATAGATTAGAAAGAGATGAGCATCTCAACAAAGCCTTCCAGTATTTTGATAAAGATCACAGCGGGTTCATAACAGTGGATGAACTTGAAACGGCCATGAAAGAATATGGCATGGGCGATGAAGGCACTATCAAGGAAATCATATCAGAAGTTGACACAGACAATGATGGTAGAATCAATTATGATGAATTCTGTGCAATGATGAGGAGCGGAAACCCACAAGGCAAGTTATTCTGA 1581 0.4371 MGQCLGKGQGSNRDYNGYRSVGETGAAQNYKAHEPYSNQPKPTSHQLPEKPSSRAPINPNKPGQNTILGKPFEDVKQIYRIGKELGRGQFGVTYLCIEISTGRPYACKSISKRKLTSRADKEDMKREIHIMQHMSGQPNIVEFKGAYEDSHSVHLVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDEKALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAVLEGHIDFESQPWPNISDSAKDLVRRMLTQDPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRVMNKLKKLALKVIAENLSEEEIKGLRAMFTNMDTDNSGTITYEELKEGLQRLGSKLTEAEVKQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLNKAFQYFDKDHSGFITVDELETAMKEYGMGDEGTIKEIISEVDTDNDGRINYDEFCAMMRSGNPQGKLF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01812 526 FunFam Calcium-dependent protein kinase 1 81 164 - -
Accr4g01812 526 Gene3D Transferase(Phosphotransferase) domain 1 165 345 - -
Accr4g01812 526 CDD EFh 456 517 IPR002048 GO:0005509
Accr4g01812 526 ProSitePatterns EF-hand calcium-binding domain. 393 405 IPR018247 -
Accr4g01812 526 Gene3D - 346 519 - -
Accr4g01812 526 CDD STKc_CAMK 79 336 - -
Accr4g01812 526 Gene3D Phosphorylase Kinase; domain 1 81 164 - -
Accr4g01812 526 ProSiteProfiles EF-hand calcium-binding domain profile. 492 522 IPR002048 GO:0005509
Accr4g01812 526 MobiDBLite consensus disorder prediction 1 68 - -
Accr4g01812 526 ProSiteProfiles EF-hand calcium-binding domain profile. 452 487 IPR002048 GO:0005509
Accr4g01812 526 FunFam calcium-dependent protein kinase 1 165 344 - -
Accr4g01812 526 MobiDBLite consensus disorder prediction 1 18 - -
Accr4g01812 526 SUPERFAMILY Protein kinase-like (PK-like) 79 344 IPR011009 -
Accr4g01812 526 ProSiteProfiles Protein kinase domain profile. 79 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01812 526 MobiDBLite consensus disorder prediction 31 65 - -
Accr4g01812 526 FunFam Calcium-dependent protein kinase 1 345 520 - -
Accr4g01812 526 ProSitePatterns EF-hand calcium-binding domain. 500 512 IPR018247 -
Accr4g01812 526 Pfam EF-hand domain pair 455 517 IPR002048 GO:0005509
Accr4g01812 526 Pfam EF-hand domain pair 385 445 IPR002048 GO:0005509
Accr4g01812 526 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
Accr4g01812 526 SMART efh_1 384 412 IPR002048 GO:0005509
Accr4g01812 526 SMART efh_1 491 519 IPR002048 GO:0005509
Accr4g01812 526 SMART efh_1 456 484 IPR002048 GO:0005509
Accr4g01812 526 SMART efh_1 420 448 IPR002048 GO:0005509
Accr4g01812 526 Coils Coil 402 422 - -
Accr4g01812 526 SMART serkin_6 79 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01812 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Accr4g01812 526 ProSitePatterns EF-hand calcium-binding domain. 429 441 IPR018247 -
Accr4g01812 526 PANTHER SERINE/THREONINE-PROTEIN KINASE 74 512 - -
Accr4g01812 526 Pfam Protein kinase domain 79 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01812 526 SUPERFAMILY EF-hand 376 516 IPR011992 -
Accr4g01812 526 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Accr4g01812 526 ProSitePatterns EF-hand calcium-binding domain. 465 477 IPR018247 -
Accr4g01812 526 ProSiteProfiles EF-hand calcium-binding domain profile. 416 451 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01812 Accr-Chr4 19593642 19597487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01812 1 522 EF-hand Containing Proteins AT3G20410 75.510 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr4g01812 Pkinase 9.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01812 K13412 - qsa:O6P43_013720 889.026