Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01810 ATGGTTGATTTGGAAGTTCAGCTTCCCACCCCCTACGATCCATTCTCTGAAGCTAAGGAATCGGATGCTCCCGGATCCAAAGGGTATGTGCATGTCAGGATACAACAGAGGAATGGAAAAAAGAGTCTGACCACAGTTCAAGGACTGAAGAAAGATTACAGTTACGAGAAGATCCTCAAGGACCTCAAAAAGGAGTTCTGCTGCAACGGCAACGTTGTGCAGGACAAAGAGCTAGGCAAGATCATTCAGCTTCAGGGTGATCAGCGCAAAAACGTTTCTCAATTCCTGGTTCAGGCCGGCCTGGTCAGGAAGGACCAGATCAAGATTCATGGTTTTTAA 339 0.469 MVDLEVQLPTPYDPFSEAKESDAPGSKGYVHVRIQQRNGKKSLTTVQGLKKDYSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVRKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01810 112 NCBIfam translation initiation factor SUI1 6 112 IPR005874 GO:0003743
Accr4g01810 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
Accr4g01810 112 Gene3D - 2 112 - -
Accr4g01810 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Accr4g01810 112 MobiDBLite consensus disorder prediction 1 27 - -
Accr4g01810 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Accr4g01810 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Accr4g01810 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Accr4g01810 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Accr4g01810 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01810 Accr-Chr4 19516962 19517300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01810 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 81.250 1.01e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01810 K03113 - gmx:100791423 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01810 4 19516962 19517300 Accr4g01810 4 19516962 19517300 ECH