Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01805 ATGGTGAACATGAATAGCCATGATGATGAGGAGAATAGTGAACATGGTTTACCTTCGATTAACGGCGTTGGCGAAGGAGGTGGTGGTGGTCAGGGTGCCGGTGTGGCGGCAGTGGCAGGAGCGGAGGAGTTTATCCTCAAGAAGGGTCCATGGTCGACCTCGGAGGACGCGGTGCTTATTGGTTATGTGACTGAGCATGGTGAAGGGAATTGGAATGCGGTGCAGAGGAAGACGGGGTTGGCTCGTTGTGGTAAGAGCTGTAGGTTGAGATGGACGAACCATTTGCGTCCAAATCTGAAGAAGGGTGCTTTTTCTCCTGAGGAAGAGGAGTTCATTCTGGAGCTTCATGCTCAGTTGGGCAACAAATGGGCTCGAATGGCTACTCTCTTACCTGGCCGAACAGACAATGAAATCAAGAACTACTGGAACACTAGGATGAAGCGCCGGCAAAGACAAGGCCTGCCACTTCATTCCAGTGATTCTGATCAGCCAACCATATCTTCAGCACCGGCCAAAATTGATTCTTCTATTACAGAATTGGATTATTATAATCAGAATCACTATCCTCTGTCTTCACTCCATACAGGATCCTCTTATTCCACCCATACCCCTTTGTTGGACTCCAATTATCTTTCTTCTTCTTCCCATTTCACCTTCCAACAACCTACTACTTCATTACACATCACCCCTCTCGATTCCAAGCATTGCCACACGTATTTTTCCCTCCCTGATGCTTCTTTAACTACCCCATTGGTGGATCTTGATGGACTCAACTTTCCAGCCCAATTTAATTCAAGTTCATGTCAAATCTTTCAGACCCCATTAGATTTATCATCTTCAGTTCCTGGGGTTCCAAGCTCATCTTCCATTTTGTTTAACAAAATGGAGCTCCCTTCAAACCAATTTGCCCCATCCAATAATGACCTGCTGGGGGACATTCTTCTGGAAGCTCAAGTATTGGTTTCTGACCAGAATCTGAAGAAACGAACCTATTTGAGTTCCAGTGAAGGAGATGGCTTCTTAGATGGATATATTGGCTTGGACGATATGCCTCATAGCTCTGTTTACTGGTCTTCAGGACTGAAACCAAAGTCAGAAGTATCAGACATGATTGAGCTTTCCTCACTGATCTCTTCTGGAATGCCTTCAACCTTTCAGGTTCCTGAATGGCACAACAACGACATTGCTGCACAGGCATCCAATGTTCAATCTTCCGGCGCTACCACCATAGCTGATGATAATTTTGAGCTTGATTTCAAACCTCTTGCTTCGTTGATTCCTGTCAACACTGCAACAAACCCTAATGAAAACCCTGGCTACTTCCCATGGGACACCTTACCTGGACTCTGCTGA 1353 0.459 MVNMNSHDDEENSEHGLPSINGVGEGGGGGQGAGVAAVAGAEEFILKKGPWSTSEDAVLIGYVTEHGEGNWNAVQRKTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEEFILELHAQLGNKWARMATLLPGRTDNEIKNYWNTRMKRRQRQGLPLHSSDSDQPTISSAPAKIDSSITELDYYNQNHYPLSSLHTGSSYSTHTPLLDSNYLSSSSHFTFQQPTTSLHITPLDSKHCHTYFSLPDASLTTPLVDLDGLNFPAQFNSSSCQIFQTPLDLSSSVPGVPSSSSILFNKMELPSNQFAPSNNDLLGDILLEAQVLVSDQNLKKRTYLSSSEGDGFLDGYIGLDDMPHSSVYWSSGLKPKSEVSDMIELSSLISSGMPSTFQVPEWHNNDIAAQASNVQSSGATTIADDNFELDFKPLASLIPVNTATNPNENPGYFPWDTLPGLC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01805 450 MobiDBLite consensus disorder prediction 150 169 - -
Accr4g01805 450 SMART sant 47 97 IPR001005 -
Accr4g01805 450 SMART sant 100 148 IPR001005 -
Accr4g01805 450 ProSiteProfiles Myb-like domain profile. 46 95 IPR001005 -
Accr4g01805 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Accr4g01805 450 CDD SANT 103 144 IPR001005 -
Accr4g01805 450 Gene3D - 103 166 - -
Accr4g01805 450 MobiDBLite consensus disorder prediction 1 34 - -
Accr4g01805 450 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 11 364 - -
Accr4g01805 450 FunFam Transcription factor GAMYB 103 149 - -
Accr4g01805 450 CDD SANT 50 95 IPR001005 -
Accr4g01805 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 95 IPR017930 -
Accr4g01805 450 Gene3D - 47 100 - -
Accr4g01805 450 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Accr4g01805 450 FunFam MYB-related transcription factor 47 100 - -
Accr4g01805 450 Pfam Myb-like DNA-binding domain 101 144 IPR001005 -
Accr4g01805 450 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Accr4g01805 450 SUPERFAMILY Homeodomain-like 47 142 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01805 Accr-Chr4 19456843 19459631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01805 26 450 MYB Transcription Factor Family AT4G26930 36.087 1.92e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr4g01805 Myb_DNA-binding 2.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01805 - - pcin:129317915 675.626