Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01796 ATGGCAAATTTGCCCCAATCGTTGTCTATGAATGCGTTCGGAGCCCCGGGTGCCTCACCCCAGAACGCGGCCGCTACTCAGGTCAACAAGGAACGTAAGCTAGCTTCAGCAGAGCACCTTGTTCTTGAACTAAGCAACCCCGAACTCCGTGAAAATGCGCTTCTGGAACTCTCTAAGAAAAGAGAGCTGTTTCAAGATCTTGCTCCATTACTTTGGAATTCTTTTGGTACTATTGCAGCACTTTTACAGGAAATAGTTTCAATATACCCTGTTCTTTCACCACCAAATCTTACCCCAGCACAATCAAATCGAGTGTGCAATGCTCTTGCACTTCTTCAGTGTGTGGCCTCTCATCCAGATACAAGGATGCTATTCCTCAATGCTCATATTCCTTTATATCTATACCCCTTCCTTAATACAACAAGCAAGTCAAGGCCGTTTGAGTATTTGAGGCTTACCAGCCTCGGTGTCATTGGTGCCTTGGTGAAGGTTGATGATACAGAAGTTATAAGCTTCCTTCTTTCAACAGAGATAATTCCTCTCTGCCTGCGCACCATGGAAATGGGCAGTGAATTGTCAAAAACAGTTGCGACATTTATAGTCCAGAAGATTCTATTGGATGATGTGGGATTGGATTATGTATGCACTACGGCTGAGCGGTTTTTTGCAGTGGGTAGAGTCTTGGGAAATATGGTGGCGGCTCTTGCCGAGCAACCGTCATCTCGTCTGTTAAAACATATCATTAGATGTTATCTCCGCCTGTCAGATAATCTAAGGGCTTGTGATGCATTACGAAGTTGTCTGCCAGACATGTTGAGAGATGCTACTTTCAACAGCTGCCTTCGGGAAGACCCAACAACCAGGAGGTGGCTGCAACAGTTGCTTATAAATGTTGGAGTGGGTCGGGTTCCTACTGCACTGCAAGCTGGAGGTAGCTTCGACCATATGATTGTGCCATAA 960 0.4562 MANLPQSLSMNAFGAPGASPQNAAATQVNKERKLASAEHLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYVCTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNLRACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLINVGVGRVPTALQAGGSFDHMIVP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01796 319 Pfam Cell differentiation family, Rcd1-like 40 298 - -
Accr4g01796 319 Gene3D - 29 299 IPR011989 -
Accr4g01796 319 FunFam Cell differentiation protein RCD1 30 301 - -
Accr4g01796 319 SUPERFAMILY ARM repeat 42 265 IPR016024 -
Accr4g01796 319 PANTHER UNCHARACTERIZED 31 300 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01796 Accr-Chr4 19283652 19290958 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Accr4g01796 Rcd1 1.2e-128 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01796 K12606 - rcu:8278928 566.614