Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01789 ATGGCGCTCATCAATTATCACGTTTTCTTGAGTTTCAGAGGGGAAGACACCCGCACAAACTTCACAGACCACTTGCACGCTGCGTTGCAGCGAAAAGGGATCGTCACTTTCAGGGACGACCAAGCACTCGAGCGAGGACGAGTTATTTCCGAGAAACTAATGAAAGCTATTGACGAATCTCTGTTTGCGATTGTCGTTCTCTCCCAGGATTATGCTTTCTCTTCTTGGTGCTTGGATGAACTGCAAAAAATCGTTGAATCCAAACAAAATTTGACAATTTTTCCAGTTTTTTACGGCGTAGATTCGTCCGACGTTCGACAACAAAAGGGAATTATTAGGGAAGCTTTTGAGAAACATGAAGGAAAACTCCCAGATTGTAAGGTCAGAAGATGGAGAAGAGCTTTAACACAAGTTGCAAATTTAGCTGGTTGGGATGCTACAAACAAGCATGAAGCAGGAATCGTAGAAGATATTGCTAAAGCAATATGGACCAAATTGCGTGTTAAATTGCCACCTAATTTTGCTCATTTAGTTGGACTTGAATCAAAGGTGGACACATTGGTCTCTCTTATGAAGATGGAGCTGAATCATAAATGTTTTATAGGAATATGGGGCATGGGCGGAATAGGCAAAACAACTCTTGCTAGAGTTGTTTATGAGGCAATTCGAGACAAGTTTGAAACTAGTTGCTTTCTTGCCAGCATAAGGAAGGATTTAGAAAGAAAGGGTTTGGTTTACTTGCAAGAGAAGTTTCTTTCTGCTCTTCTTCACCAACGAACAAACATTAAAATCAGTGACTCCTATGATGGAATTGAGGCAATAAGAAACTTTTCTCGCTATAAAAAAGTTCTTATTGTTCTTGATGACGTGAGTCATATAAGCCAACTAGAGAATTTAGTTGGAGACAAAGATTGGTTTGGGGATGGAAGCAGAATCTTAGTAACTACAAGAGACATACACTTGTTGACAGCTCATGATCAATTTGAGAAGTATGAAATAAAGATGCTAGGAAAAGGTGCATCTCTCAATCTCTTGTGTAAGCATGCTTTTAAAATCGATTATCCTCAACAAGGATATTGGGACTTGTCCAAAGACGTGGTTGATTATGCAGGTGGTCTTCCTTTAGCTCTCCAAGTGTTGGGCTCATTTCTTTGTAAAAGAAGTACAGCTGAGTGGAGAGACACATTGAATAAGTTAAAGCGAAAGTTACCTACAGATATATTCAATATACTTCGAATAAGTTATGATGGGCTAGATGATGATGAAGAGTACAAGTCTATATTCTTAGATATTGCATGCTTTTTTAATTGGGAGAAAAAAGTTGAAGTGACTAAAATATTGGAAAATTGTGGTCTCCATCCAACAATTGGAATCCAAGTTCTAATTGAAAAATCTTTGTTGAGTACTTACATTTCATTCAATGGCCAAGAATATGTATATATGCATGATTTGCTTCAAGAGATGGGAAAAAACATTGTTAGGCAAGAATCTCCCAGTGATGCTGGCAGACGCAGTAGGTTGTGGACGTGGGAGCAGATTGATCAAGTGTTTAGAGGAAATGCAGGAAGCAAACATGTTCAAAGTATAGTTTTGAATCTAAAGCAAGCATATGAAGCAAATTGGCAGCCGAATTGCTTCTCAAAGATGGTTGATCTTAGATTACTCTACTTAAGTAATGTGAATCTTTCGCATGGTCTCAATTCTTTTCCTACTACTTTGAAAGTTGTCATATGGGAGAAATTTCCTTTGGAAACTCTACCACGCAATATTGACCAACTGTATCAGCTTGTGGAGCTTACCTTACATGATAGCAGAATCAGGAAACTTTGGAATGGAAGACCGTTTTTAGGGATGTTGAAGTTCATGGACTTGAGTTCCTCCAAGGAGCTAATTGAGACTCCAGATTTCAAGGGAGTTCCAAACCTTGAAAGATTGTTTCTTGAGCATTGCATAAATCTAGTTAAGGTTCATGAGTCCCTTGGGCAGCTCAAGAAGCTAGTTAAGTTGAGTTTGAGAGGCTGCCAAAATCTCAGGACCCTTCCAAGGAAATTGGAACTGAATTCTCTGCAGGACTTTTCTATTTATGGATGCTCAAAACTCGAAAAGCTTTCTGAATTTGGAGAAGACATGAAATGTCTATCCATCTTTGATCTGAGTGGAACTAATATAAAAGAAGTACCATCTTCCATCGTTCATTTATCAAATCTTAAGGAGCTATACCTCCAGGGATGCTATGGGCAAGGTTCGAATTCATGGAGCTTCTTTGGGTTCTTTGGTCATTTAAAAGGTTGGTTTCTGGGGAATCCAGTAGTATCCAAGGGATTGAAGTTGCCAAATTCTTTCTCAGGCCTTTCTTCATTAAGAAAACTGGATTTAAGTTTCAGCAATCTGTATGATGGAGCGATCCCTAATGATTTAAATGGCTTATCATCATTGATGGATTTTAATCTGAGGGGAAACAATTTTACTTCCCTACCTGTTGGCTGCATCTCCAATCTTCCCAAACTTGAACAGTTTGACTTGAGTAATTGTGTTGAGCTTCAGTCAATTCCTTTGCTTCCACCTAATTTACTTAGAGTATATGTAGGCTGTTGTCCTTCTATTGAACCCTTATTGGACATGCAACATCTCTTTGAATCACTATTTGTCTATAAGCGATGTAGTCTTCTCCAACATGAAGTCATTTTCCTGCATATTTTAGGAGATAAGATCCCAACTGCAGTTTTTACGCAGCAAAAGTTCCAAATTAATCCCCTTGGAACAAGTGTATCTATAATGGTGGGCATCCCTAATTTTCAGTGTGGGAGTGAATTGTGGGGAATTGCTGTATGCATGGTGGTAAAAAGCGAGAAGGAATTATATTACTGCTCAAGATCCAATTTTTACTGGGGATTCAGAGCTGGTGATGAAGATGAAAGCCTTGAGGAACCACAGCATGTATTTTATGTTGGGAAAGCATATTCAATCCCTCATCTTTATATAGCATTTTTCCCTTTGATCAATACTCAAAAGTTTGGGAGACATTTAAGAGGTGAATCCCACCAACTTGAATTGCAAATTCAGGTTGAAAAAGAGTTACGCATCAAGGATTGTGGTTGGCGTCTTGTGTGCAACAAAGATTTTGATGTGTGCAATACAAGCACCGGCCCTCGTGCTTTTCATAAAAACAATTCACAAGCAAAAGTGCTGTTATGA 3195 0.3872 MALINYHVFLSFRGEDTRTNFTDHLHAALQRKGIVTFRDDQALERGRVISEKLMKAIDESLFAIVVLSQDYAFSSWCLDELQKIVESKQNLTIFPVFYGVDSSDVRQQKGIIREAFEKHEGKLPDCKVRRWRRALTQVANLAGWDATNKHEAGIVEDIAKAIWTKLRVKLPPNFAHLVGLESKVDTLVSLMKMELNHKCFIGIWGMGGIGKTTLARVVYEAIRDKFETSCFLASIRKDLERKGLVYLQEKFLSALLHQRTNIKISDSYDGIEAIRNFSRYKKVLIVLDDVSHISQLENLVGDKDWFGDGSRILVTTRDIHLLTAHDQFEKYEIKMLGKGASLNLLCKHAFKIDYPQQGYWDLSKDVVDYAGGLPLALQVLGSFLCKRSTAEWRDTLNKLKRKLPTDIFNILRISYDGLDDDEEYKSIFLDIACFFNWEKKVEVTKILENCGLHPTIGIQVLIEKSLLSTYISFNGQEYVYMHDLLQEMGKNIVRQESPSDAGRRSRLWTWEQIDQVFRGNAGSKHVQSIVLNLKQAYEANWQPNCFSKMVDLRLLYLSNVNLSHGLNSFPTTLKVVIWEKFPLETLPRNIDQLYQLVELTLHDSRIRKLWNGRPFLGMLKFMDLSSSKELIETPDFKGVPNLERLFLEHCINLVKVHESLGQLKKLVKLSLRGCQNLRTLPRKLELNSLQDFSIYGCSKLEKLSEFGEDMKCLSIFDLSGTNIKEVPSSIVHLSNLKELYLQGCYGQGSNSWSFFGFFGHLKGWFLGNPVVSKGLKLPNSFSGLSSLRKLDLSFSNLYDGAIPNDLNGLSSLMDFNLRGNNFTSLPVGCISNLPKLEQFDLSNCVELQSIPLLPPNLLRVYVGCCPSIEPLLDMQHLFESLFVYKRCSLLQHEVIFLHILGDKIPTAVFTQQKFQINPLGTSVSIMVGIPNFQCGSELWGIAVCMVVKSEKELYYCSRSNFYWGFRAGDEDESLEEPQHVFYVGKAYSIPHLYIAFFPLINTQKFGRHLRGESHQLELQIQVEKELRIKDCGWRLVCNKDFDVCNTSTGPRAFHKNNSQAKVLL 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01789 1064 Gene3D Ribonuclease Inhibitor 521 707 IPR032675 -
Accr4g01789 1064 Gene3D Ribonuclease Inhibitor 708 892 IPR032675 -
Accr4g01789 1064 Gene3D - 336 419 IPR042197 -
Accr4g01789 1064 PRINTS Disease resistance protein signature 831 847 - -
Accr4g01789 1064 PRINTS Disease resistance protein signature 277 291 - -
Accr4g01789 1064 PRINTS Disease resistance protein signature 370 384 - -
Accr4g01789 1064 PRINTS Disease resistance protein signature 200 215 - -
Accr4g01789 1064 SMART till_3 5 141 IPR000157 GO:0007165
Accr4g01789 1064 SUPERFAMILY "Winged helix" DNA-binding domain 406 517 IPR036390 -
Accr4g01789 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 431 IPR027417 -
Accr4g01789 1064 FunFam Disease resistance protein (TIR-NBS-LRR class) 338 419 - -
Accr4g01789 1064 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 705 IPR044974 GO:0006952
Accr4g01789 1064 FunFam Disease resistance protein (TIR-NBS-LRR class) 3 168 - -
Accr4g01789 1064 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 144 IPR035897 -
Accr4g01789 1064 Gene3D - 4 166 IPR035897 -
Accr4g01789 1064 SUPERFAMILY L domain-like 498 870 - -
Accr4g01789 1064 Gene3D - 167 333 IPR027417 -
Accr4g01789 1064 Pfam NB-ARC domain 189 404 IPR002182 GO:0043531
Accr4g01789 1064 ProSiteProfiles TIR domain profile. 4 170 IPR000157 GO:0007165
Accr4g01789 1064 Pfam TIR domain 5 170 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01789 Accr-Chr4 19230092 19234637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01789 5 812 WRKY Transcription Factor Family AT4G12020 31.731 9.15e-97 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01789 - - pcin:129318799 1721.83