Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr4g01774 | ATGAGGAGAGTTAGAGGAGCTGCCGCTGTTAAACAGGCGGCGGCGATGACGGCGGCGGTTGAACTCAATGGATCCGGTCCAGGGGCGGTTTTAAAAGAGCCTAGGTACCGGGGCGTGAGGAAGAGGCCTTGGGGTAGATTCGCCGCCGAGATCAGAGACCCTTTGAAGAAAGCTCGTGTCTGGCTAGGCACCTTTGACTCCGCCGAGGAAGCGGCTCGAGCCTACGACGCCGCGGCGATAGCCCTCCGTGGACCCAAGGCCAAGACCAATTTCCCTATCTCTCCTTCATTTTCGCCGTTTTGTTATCCCACCACCAACCCTAACGTCAACGACGATGTTTTGGATCACCGGTTGTACTCGAACAACGGTTTCCAGGAGCACCAGGTTAACCCTCAGAGACCAGCCACCAGCAGCATGAGCAGCACGTCCTTCAGCGGCCCACGGCCACCGTCAACGACGGCCACGGCAGCAGTAAACCGGAGATATCCCCGGACGCCGCCGGTCATGCCGGATGATTGCCACAGCGACTGCGATTCCTCGTCATCAGTGATCGATGGCGACGGAGACGTTGAGGTCGCCGATTTCGCCTCATCATCGTTCCGTCAACCGTTGCCTTTCGATCTCAACTTCCCACCGTTGGATGCCGCGAACATGGCCGTCGACGATCTTCACTGCACCGCTCTCTGCCTCTGA | 693 | 0.5873 | MRRVRGAAAVKQAAAMTAAVELNGSGPGAVLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAAIALRGPKAKTNFPISPSFSPFCYPTTNPNVNDDVLDHRLYSNNGFQEHQVNPQRPATSSMSSTSFSGPRPPSTTATAAVNRRYPRTPPVMPDDCHSDCDSSSSVIDGDGDVEVADFASSSFRQPLPFDLNFPPLDAANMAVDDLHCTALCL | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr4g01774 | 230 | FunFam | Ethylene-responsive transcription factor 2 | 35 | 93 | - | - | |
Accr4g01774 | 230 | Pfam | AP2 domain | 34 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Accr4g01774 | 230 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 23 | 187 | - | - | |
Accr4g01774 | 230 | SMART | rav1_2 | 35 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Accr4g01774 | 230 | Gene3D | AP2/ERF domain | 35 | 94 | IPR036955 | GO:0003700|GO:0006355 | |
Accr4g01774 | 230 | PRINTS | Ethylene responsive element binding protein signature | 36 | 47 | IPR001471 | GO:0003700|GO:0006355 | |
Accr4g01774 | 230 | PRINTS | Ethylene responsive element binding protein signature | 58 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Accr4g01774 | 230 | SUPERFAMILY | DNA-binding domain | 35 | 94 | IPR016177 | GO:0003677 | |
Accr4g01774 | 230 | CDD | AP2 | 34 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Accr4g01774 | 230 | MobiDBLite | consensus disorder prediction | 126 | 159 | - | - | |
Accr4g01774 | 230 | ProSiteProfiles | AP2/ERF domain profile. | 35 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Accr4g01774 | 230 | MobiDBLite | consensus disorder prediction | 126 | 160 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr4g01774 | Accr-Chr4 | 18898109 | 18898801 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr4g01774 | 1 | 230 | AP2-EREBP Transcription Factor Family | AT3G20310 | 56.371 | 5.90e-56 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Accr4g01774 | AP2 | 7.7e-16 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr4g01774 | K09286 | - | qsa:O6P43_013653 | 243.817 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Accr4g01774 | 4 | 18898109 | 18898801 | Accr4g01774 | 4 | 18898109 | 18898801 | ECH |