Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01774 ATGAGGAGAGTTAGAGGAGCTGCCGCTGTTAAACAGGCGGCGGCGATGACGGCGGCGGTTGAACTCAATGGATCCGGTCCAGGGGCGGTTTTAAAAGAGCCTAGGTACCGGGGCGTGAGGAAGAGGCCTTGGGGTAGATTCGCCGCCGAGATCAGAGACCCTTTGAAGAAAGCTCGTGTCTGGCTAGGCACCTTTGACTCCGCCGAGGAAGCGGCTCGAGCCTACGACGCCGCGGCGATAGCCCTCCGTGGACCCAAGGCCAAGACCAATTTCCCTATCTCTCCTTCATTTTCGCCGTTTTGTTATCCCACCACCAACCCTAACGTCAACGACGATGTTTTGGATCACCGGTTGTACTCGAACAACGGTTTCCAGGAGCACCAGGTTAACCCTCAGAGACCAGCCACCAGCAGCATGAGCAGCACGTCCTTCAGCGGCCCACGGCCACCGTCAACGACGGCCACGGCAGCAGTAAACCGGAGATATCCCCGGACGCCGCCGGTCATGCCGGATGATTGCCACAGCGACTGCGATTCCTCGTCATCAGTGATCGATGGCGACGGAGACGTTGAGGTCGCCGATTTCGCCTCATCATCGTTCCGTCAACCGTTGCCTTTCGATCTCAACTTCCCACCGTTGGATGCCGCGAACATGGCCGTCGACGATCTTCACTGCACCGCTCTCTGCCTCTGA 693 0.5873 MRRVRGAAAVKQAAAMTAAVELNGSGPGAVLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAAIALRGPKAKTNFPISPSFSPFCYPTTNPNVNDDVLDHRLYSNNGFQEHQVNPQRPATSSMSSTSFSGPRPPSTTATAAVNRRYPRTPPVMPDDCHSDCDSSSSVIDGDGDVEVADFASSSFRQPLPFDLNFPPLDAANMAVDDLHCTALCL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01774 230 FunFam Ethylene-responsive transcription factor 2 35 93 - -
Accr4g01774 230 Pfam AP2 domain 34 84 IPR001471 GO:0003700|GO:0006355
Accr4g01774 230 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 187 - -
Accr4g01774 230 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Accr4g01774 230 Gene3D AP2/ERF domain 35 94 IPR036955 GO:0003700|GO:0006355
Accr4g01774 230 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Accr4g01774 230 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Accr4g01774 230 SUPERFAMILY DNA-binding domain 35 94 IPR016177 GO:0003677
Accr4g01774 230 CDD AP2 34 94 IPR001471 GO:0003700|GO:0006355
Accr4g01774 230 MobiDBLite consensus disorder prediction 126 159 - -
Accr4g01774 230 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Accr4g01774 230 MobiDBLite consensus disorder prediction 126 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01774 Accr-Chr4 18898109 18898801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01774 1 230 AP2-EREBP Transcription Factor Family AT3G20310 56.371 5.90e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr4g01774 AP2 7.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01774 K09286 - qsa:O6P43_013653 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01774 4 18898109 18898801 Accr4g01774 4 18898109 18898801 ECH