Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01747 ATGGAATTGGCGACGGTTGCTGAGGGAATGGAACCGCCGGAGGAGACCCGATCTGAGGGCTTGCCGGTGAAAAGGCCGATTGAGAATGGTGGGGGTGAGGAATTGGCCAAGAAGCCTAAGGTTGAAGCAGCTGATGCTGCTGCGTCTAGCGGGGAGTTGAAGAGAGTGGCGGAGATTGTGCTGGTTTTGTCGACAATGGCGGCAATGCGAGGTGGGAAGAAGCCCACTAATGTGGAGATTGAGTTGATGAAGGAAGCGAGGATGAAGTTAGTGGAGTTGTGTCAAGGGATGGCTCCCAAGGATATTGTGGCGAGGGAAGCTGTGGGGTCTGTGATTGAGGATCTTGGATTGAACGGCAAGATTAAAGATCAGAGATTAGGGTTTCAAACTCCAAAGATGTCTATAACCGAAAGGTTCTCACTCTCCAAGTTGAAGATGGAAGAGTCAAAGAAACTTCCTGAACATTCTGCTCCATCAACTTCACAGCCACTGCAAACAAGCATGGGTGGTGGAATGGTTGAAAACCGTACGCCATCTCATACAGTTCGAATGTATCCTTTGGACAAATCAAGCCACACAGGACTCTCTTCTTCTGGTACCATAGCTTCTCCCCTGACTCATGTTTCTGCTGGATCTTCTGCTGCTTTGCAATATCAATCAAATGCTGGTGAAGTAAAACCACCTATAGTTTCTGGTGGAATGCCTAGCAGTCACTTGGGTAGAACTTCATCTTCAGCAGCATTGCCTAAAGTTGAACAACCACAGTTCAGAGTTGATGTAGGATCAAGTGGGCCTTATTTGCTGCATGCTCAAGCAAACACTTCATCAAACCAACCCTTGGTGAATGCTCCAACATGGTCAATACAAACTCAAACTCAATCTGCCTCATTCCCTAGAAGTACACAAGAAAGCAAAGTGACTGGACATAACCCTGTCAAGGTTGATGGAATGGGTGACCTAACTGGGCCAAGAGCTGCTTCACAAATAGCACGGGATCAGAACTACAGACCATTAGTAACTCAAACAGCACCTGGAAATTTGTCTAGCTTTCACCAACCATTACAGGGCATGAACATTATTCAGCCTCCTTCACTTCCTAATAATCATTCTGAAATTGCAAAGATTGTCCAGAAACTGTTACAGCCAAAGCTTCCCGAGCATCCCACATGGACTCCTCCATCAAGGGATTATATGAACAAGGCATTTACATGCCAGATGTGTGATCTCACAGTCAATGAAGTGGATACTGTGCTTCTTTGTGATGCTTGTGAAAAAGGGTTTCACTTGAAGTGTTTGCAGCCATCACTTTTGAGAGGAATTCCTAGAGGCGAGTGGCACTGCATGAGGTGCTTGACATTAAGCGGTGGAAAGCCTTTGCCTCCAAAATATGGTCGTGTCATGAGGTCCGCGAACACTCCGCCAAAACTGCCCTCTAACACAGGTGGAGTTCAACCATCCTCAGAGAAGAAAACTGGAGTTGCAGCTCTAAAGGTCAGCTCACAGGAGTTAACAACAAATGGAGGCTCTGTTTTGACTGGTGCTGCTAGTAACAATAACAATGCTGAGCTTCCATCTGTCTCAAAGGTCCCTGATACAAAAGAAATGCAAGGTGAGAGTTCTTCTGAACAAATAATTTCTGAGCCATCTACCTCTAAAGAGAGAACCTTTGCTTCAGAACCAGAAGTACTTCCTCAATCAAATGAGTCAGTTAAACCTAACAACTTGCAATTGTCAAAAAATGCACAAGTTGAACTGACGCCACTATCAAACCATGTTGAAGTTTCATTATATAAACATGGTGACAATAGTTTGACAGATAATAACAGAAAGGAATCTCATGGGGGAGAAAGTTTGATATATGATATCAAACGTGATGACCAATATGTTGCACTAGCAAATTCTGATAAAAGTTCTGGAACACATGCTGAAGGTAAACAATGCACTGCATTATATTCAGATGGCTTACATGCAGTAGAATGGGTTGGTGATCTTGTACAACTTGTTGATGAGAAAATGTTTTACCAATCTTGCCAACTTAATGGAGTTACGTATAGGCTGCAAGATCATGCTCTTTTTAAATCCAGTCATGGCAAGTTATTTCCATCGAAACTGCAGTCGATGTTTGAAGATAGCAAAACTGGATTGAAGTGGGTAAATGTGACGACGTGCTACTTTCCTGGTGATTTACCAGGGAATATCCCTCATCCATGTATATCTGAAGTCAATGAGGTTTATGAATCTAATAGTGATAGAACTGAAATGGCTGGCTCCATTCAAGGTCCTTGTGAAGTCCTCCCGTCTGATAAATTTCAACAAGAAAACAATAGACGAAGAGGGTTAGAACCTGATGAAAGTGCTAGACTTCGGCCAATTTTCCTGTGCAGATGGTTCTATGATGGAGTCAAAAAATTATTTCAGCCTGTTATCAGTTGA 2433 0.4353 MELATVAEGMEPPEETRSEGLPVKRPIENGGGEELAKKPKVEAADAAASSGELKRVAEIVLVLSTMAAMRGGKKPTNVEIELMKEARMKLVELCQGMAPKDIVAREAVGSVIEDLGLNGKIKDQRLGFQTPKMSITERFSLSKLKMEESKKLPEHSAPSTSQPLQTSMGGGMVENRTPSHTVRMYPLDKSSHTGLSSSGTIASPLTHVSAGSSAALQYQSNAGEVKPPIVSGGMPSSHLGRTSSSAALPKVEQPQFRVDVGSSGPYLLHAQANTSSNQPLVNAPTWSIQTQTQSASFPRSTQESKVTGHNPVKVDGMGDLTGPRAASQIARDQNYRPLVTQTAPGNLSSFHQPLQGMNIIQPPSLPNNHSEIAKIVQKLLQPKLPEHPTWTPPSRDYMNKAFTCQMCDLTVNEVDTVLLCDACEKGFHLKCLQPSLLRGIPRGEWHCMRCLTLSGGKPLPPKYGRVMRSANTPPKLPSNTGGVQPSSEKKTGVAALKVSSQELTTNGGSVLTGAASNNNNAELPSVSKVPDTKEMQGESSSEQIISEPSTSKERTFASEPEVLPQSNESVKPNNLQLSKNAQVELTPLSNHVEVSLYKHGDNSLTDNNRKESHGGESLIYDIKRDDQYVALANSDKSSGTHAEGKQCTALYSDGLHAVEWVGDLVQLVDEKMFYQSCQLNGVTYRLQDHALFKSSHGKLFPSKLQSMFEDSKTGLKWVNVTTCYFPGDLPGNIPHPCISEVNEVYESNSDRTEMAGSIQGPCEVLPSDKFQQENNRRRGLEPDESARLRPIFLCRWFYDGVKKLFQPVIS 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01747 810 MobiDBLite consensus disorder prediction 295 319 - -
Accr4g01747 810 MobiDBLite consensus disorder prediction 468 492 - -
Accr4g01747 810 MobiDBLite consensus disorder prediction 1 42 - -
Accr4g01747 810 MobiDBLite consensus disorder prediction 147 171 - -
Accr4g01747 810 ProSitePatterns Zinc finger PHD-type signature. 404 450 IPR019786 -
Accr4g01747 810 MobiDBLite consensus disorder prediction 226 248 - -
Accr4g01747 810 ProSiteProfiles Zinc finger PHD-type profile. 401 453 IPR019787 -
Accr4g01747 810 SUPERFAMILY FYVE/PHD zinc finger 394 458 IPR011011 -
Accr4g01747 810 CDD BAH 681 808 - -
Accr4g01747 810 Gene3D - 661 809 IPR043151 -
Accr4g01747 810 SMART PHD_3 403 451 IPR001965 -
Accr4g01747 810 MobiDBLite consensus disorder prediction 507 573 - -
Accr4g01747 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 364 457 IPR013083 -
Accr4g01747 810 ProSiteProfiles BAH domain profile. 682 809 IPR001025 GO:0003682
Accr4g01747 810 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 15 808 - -
Accr4g01747 810 MobiDBLite consensus disorder prediction 472 492 - -
Accr4g01747 810 Pfam PHD-finger 404 451 IPR019787 -
Accr4g01747 810 MobiDBLite consensus disorder prediction 155 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01747 Accr-Chr4 18522646 18526925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01747 414 495 C2H2 Transcription Factor Family AT3G01460 29.885 4.49e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr4g01747 PHD 9.9e-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01747 - - gmx:100807139 1013.06