Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01746 ATGGAATTGGCGACGGTTGCTGAGGGAATGGAACCGCCGGAGGAGACCCGATCTGAGGGCTTGCCGGTGAAAAGGCCGATTGAGAATGGTGGGGGTGAGGAATTGGCCAAGAAGCCTAAGGTTGAAGCAGCTGATGCTGCTGCGTCTAGCGGGGAGTTGAAGAGAGTGGCGGAGATTGTGCTGGTTTTGTCGACAATGGCGGCAATGCGAGGTGGGAAGAAGCCCACTAATGTGGAGATTGAGTTGATGAAGGAAGCGAGGATGAAGTTAGTGGAGTTGTGTCAAGGGATGGCTCCCAAGGATATTGTGGCGAGGGAAGCTGTGGGGTCTGTGATTGAGGATCTTGGATTGAACGGCAAGATTAAAGATCAGAGATTAGGGTTTCAAACTCCAAAGATGTCTATAACCGAAAGGTTCTCACTCTCCAAGTTGAAGATGGAAGAGTCAAAGAAACTTCCTGAACATTCTGCTCCATCAACTTCACAGCCACTGCAAACAAGCATGGGTGGTGGAATGGTTGAAAACCGTACGCCATCTCATACAGTTCGAATGTATCCTTTGGACAAATCAAGCCACACAGGACTCTCTTCTTCTGGTACCATAGCTTCTCCCCTGACTCATGTTTCTGCTGGATCTTCTGCTGCTTTGCAATATCAATCAAATGCTGGTGAAGTAAAACCACCTATAGTTTCTGGTGGAATGCCTAGCAGTCACTTGGGTAGAACTTCATCTTCAGCAGCATTGCCTAAAGTTGAACAACCACAGTTCAGAGTTGATGTAGGATCAAGTGGGCCTTATTTGCTGCATGCTCAAGCAAACACTTCATCAAACCAACCCTTGGTGAATGCTCCAACATGGTCAATACAAACTCAAACTCAATCTGCCTCATTCCCTAGAAGTACACAAGAAAGCAAAGTGACTGGACATAACCCTGTCAAGGTTGATGGAATGGGTGACCTAACTGGGCCAAGAGCTGCTTCACAAATAGCACGGGATCAGAACTACAGACCATTAGTAACTCAAACAGCACCTGGAAATTTGTCTAGCTTTCACCAACCATTACAGGGCATGAACATTATTCAGCCTCCTTCACTTCCTAATAATCATTCTGAAATTGCAAAGATTGTCCAGAAACTGTTACAGCCAAAGCTTCCCGAGCATCCCACATGGACTCCTCCATCAAGGGATTATATGAACAAGGCATTTACATGCCAGATGTGTGATCTCACAGTCAATGAAGTGGATACTGTGCTTCTTTGTGATGCTTGTGAAAAAGGGTTTCACTTGAAGTGTTTGCAGCCATCACTTTTGAGAGGAATTCCTAGAGGCGAGTGGCACTGCATGAGGTGCTTGACATTAAGCGGTGGAAAGCCTTTGCCTCCAAAATATGGTCGTGTCATGAGGTCCGCGAACACTCCGCCAAAACTGCCCTCTAACACAGGTGGAGTTCAACCATCCTCAGAGAAGAAAACTGGAGTTGCAGCTCTAAAGGTCAGCTCACAGGAGTTAACAACAAATGGAGGCTCTGTTTTGACTGGTGCTGCTAGTAACAATAACAATGCTGAGCTTCCATCTGTCTCAAAGGTCCCTGATACAAAAGAAATGCAAGGTAACACTCATTCGTCCAGCAGCAAACACATGGATGAGAAGCCTGACCCAAATATCTCATTAAAATCCCTTAGTGAAGCTTCTAGTCCTTCTGTTGGCTTGCCAGGTGAGAGTTCTTCTGAACAAATAATTTCTGAGCCATCTACCTCTAAAGAGAGAACCTTTGCTTCAGAACCAGAAGTACTTCCTCAATCAAATGAGTCAGTTAAACCTAACAACTTGCAATTGTCAAAAAATGCACAAGTTGAACTGACGCCACTATCAAACCATGTTGAAGTTTCATTATATAAACATGGTGACAATAGTTTGACAGATAATAACAGAAAGGAATCTCATGGGGGAGAAAGTTTGATATATGATATCAAACGTGATGACCAATATGTTGCACTAGCAAATTCTGATAAAAGTTCTGGAACACATGCTGAAGGTAAACAATGCACTGCATTATATTCAGATGGCTTACATGCAGTAGAATGGGTTGGTGATCTTGTACAACTTGTTGATGAGAAAATGTTTTACCAATCTTGCCAACTTAATGGAGTTACGTATAGGCTGCAAGATCATGCTCTTTTTAAATCCAGTCATGGCAAGTTATTTCCATCGAAACTGCAGTCGATGTTTGAAGATAGCAAAACTGGATTGAAGTGGGTAAATGTGACGACGTGCTACTTTCCTGGTGATTTACCAGGGAATATCCCTCATCCATGTATATCTGAAGTCAATGAGGTTTATGAATCTAATAGTGATAGAACTGAAATGGCTGGCTCCATTCAAGGTCCTTGTGAAGTCCTCCCGTCTGATAAATTTCAACAAGAAAACAATAGACGAAGAGGGTTAGAACCTGATGAAAGTGCTAGACTTCGGCCAATTTTCCTGTGCAGATGGTTCTATGATGGAGTCAAAAAATTATTTCAGCCTGTTATCAGTTGA 2538 0.4358 MELATVAEGMEPPEETRSEGLPVKRPIENGGGEELAKKPKVEAADAAASSGELKRVAEIVLVLSTMAAMRGGKKPTNVEIELMKEARMKLVELCQGMAPKDIVAREAVGSVIEDLGLNGKIKDQRLGFQTPKMSITERFSLSKLKMEESKKLPEHSAPSTSQPLQTSMGGGMVENRTPSHTVRMYPLDKSSHTGLSSSGTIASPLTHVSAGSSAALQYQSNAGEVKPPIVSGGMPSSHLGRTSSSAALPKVEQPQFRVDVGSSGPYLLHAQANTSSNQPLVNAPTWSIQTQTQSASFPRSTQESKVTGHNPVKVDGMGDLTGPRAASQIARDQNYRPLVTQTAPGNLSSFHQPLQGMNIIQPPSLPNNHSEIAKIVQKLLQPKLPEHPTWTPPSRDYMNKAFTCQMCDLTVNEVDTVLLCDACEKGFHLKCLQPSLLRGIPRGEWHCMRCLTLSGGKPLPPKYGRVMRSANTPPKLPSNTGGVQPSSEKKTGVAALKVSSQELTTNGGSVLTGAASNNNNAELPSVSKVPDTKEMQGNTHSSSSKHMDEKPDPNISLKSLSEASSPSVGLPGESSSEQIISEPSTSKERTFASEPEVLPQSNESVKPNNLQLSKNAQVELTPLSNHVEVSLYKHGDNSLTDNNRKESHGGESLIYDIKRDDQYVALANSDKSSGTHAEGKQCTALYSDGLHAVEWVGDLVQLVDEKMFYQSCQLNGVTYRLQDHALFKSSHGKLFPSKLQSMFEDSKTGLKWVNVTTCYFPGDLPGNIPHPCISEVNEVYESNSDRTEMAGSIQGPCEVLPSDKFQQENNRRRGLEPDESARLRPIFLCRWFYDGVKKLFQPVIS 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01746 845 MobiDBLite consensus disorder prediction 295 319 - -
Accr4g01746 845 MobiDBLite consensus disorder prediction 1 42 - -
Accr4g01746 845 Gene3D - 696 844 IPR043151 -
Accr4g01746 845 MobiDBLite consensus disorder prediction 147 171 - -
Accr4g01746 845 ProSitePatterns Zinc finger PHD-type signature. 404 450 IPR019786 -
Accr4g01746 845 ProSiteProfiles BAH domain profile. 717 844 IPR001025 GO:0003682
Accr4g01746 845 MobiDBLite consensus disorder prediction 472 493 - -
Accr4g01746 845 CDD BAH 716 843 - -
Accr4g01746 845 MobiDBLite consensus disorder prediction 507 607 - -
Accr4g01746 845 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 15 843 - -
Accr4g01746 845 MobiDBLite consensus disorder prediction 226 248 - -
Accr4g01746 845 ProSiteProfiles Zinc finger PHD-type profile. 401 453 IPR019787 -
Accr4g01746 845 SMART PHD_3 403 451 IPR001965 -
Accr4g01746 845 Pfam PHD-finger 404 451 IPR019787 -
Accr4g01746 845 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 403 452 IPR013083 -
Accr4g01746 845 SUPERFAMILY FYVE/PHD zinc finger 394 458 IPR011011 -
Accr4g01746 845 MobiDBLite consensus disorder prediction 557 607 - -
Accr4g01746 845 MobiDBLite consensus disorder prediction 466 493 - -
Accr4g01746 845 MobiDBLite consensus disorder prediction 507 542 - -
Accr4g01746 845 MobiDBLite consensus disorder prediction 155 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01746 Accr-Chr4 18522646 18526925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01746 414 495 C2H2 Transcription Factor Family AT3G01460 29.885 5.34e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr4g01746 PHD 1e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01746 - - gmx:100807139 1056.2