Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01744 ATGGCATCATCTTCAGACTCATGGATGAAGGAATATAACGAAGCCGTCAAACTTGCTGATGATATCAGTGGCATGATTTCTGAACGGAATTCATTTCCTACATCTGGACCTGAAGCCCAGCGCCATGCATCTGCTATAAGAAGGAAGATAACAATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTGTCAAAGCTTCCTGGGAAACAGCCTATATCGGACAAGGAGCTGAATCGGCGCAGGGACATGATTGCAAATTTGAGGTCAAAAGTTAACCAAATGGCATCAGCATTGAATATGTCTCACTTTGCAAACAGGGATAGTTTGCTTGGACCAGATACAAAACAACCTGATGCGATGAGCAGAACAGTTGGCTTGGATAACAGTGGACTTGTTGGACTTCAACGGCAAGTTATGAGAGAGCAAGATGAGGGCCTTGAGAAATTGGAGCAGACTGTAACAAGTACGAAACATATTGCATTGGCTGTAAATGAAGAACTGGATTTACACACTAGACTCATTGATGACTTGGACCAGCATGTAGATGTTACAGATTCTCGGCTACAGAGGGTGCAGAAGAACTTGGCAATTTTGAATAAGCGTACCAAGGGTGGTTGCTCCTGCTTGTGTTTGCTTTTATCAGTTGTTGGTATAGTGGTTTTGGTTGGTGTTATATTTCTGTTGATCAAATATTTGTAA 702 0.4217 MASSSDSWMKEYNEAVKLADDISGMISERNSFPTSGPEAQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISDKELNRRRDMIANLRSKVNQMASALNMSHFANRDSLLGPDTKQPDAMSRTVGLDNSGLVGLQRQVMREQDEGLEKLEQTVTSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLQRVQKNLAILNKRTKGGCSCLCLLLSVVGIVVLVGVIFLLIKYL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01744 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Accr4g01744 233 PANTHER SYNTAXIN 31 219 IPR045242 -
Accr4g01744 233 SUPERFAMILY SNARE fusion complex 128 198 - -
Accr4g01744 233 Gene3D - 138 201 - -
Accr4g01744 233 SUPERFAMILY t-snare proteins 26 100 IPR010989 GO:0016020|GO:0016192
Accr4g01744 233 CDD SNARE_Qc 140 197 - -
Accr4g01744 233 SMART tSNARE_6 132 199 IPR000727 -
Accr4g01744 233 FunFam syntaxin-51 isoform X2 139 201 - -
Accr4g01744 233 Pfam SNARE domain 174 223 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01744 Accr-Chr4 18500893 18502478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01744 1 233 SNARE and Associated Proteins AT1G16240 72.103 1.20e-124 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01744 K08503 - cave:132175282 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01744 4 18500893 18502478 Accr4g01744 4 18500893 18502478 ECH