Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01717 ATGCCGATGGTGGAGCCTGAAGGATCGGGAGACACTGAAGCGTTCGTCGAAGTTGATCCGACCAGAAGGTACGGGCGGTACCCTGAGCTGTTAGGTTCCGGTGCCGTGAAGAGAGTTTACAGAGCATTTGATCAAGAGGAAGGAATAGAAGTGGCGTGGAACCAGGTGAAACTGAGGAACTTCAGCGACAATCCGGCCATGTTGGAGCGGCTTTACTCCGAAGTGAGATTGCTGAGAAATCTCGCTAATAAGAACATCATATCGCTCTACCATTTCTGGACGGACGGCGAACGGAGCACTCTGAACTTCATCACTGAGGTCTGTTCCAGCGGGAATCTGAGGGAGTACCGGAAAAAGCACAGGCATGTGTCGATGAAGGCGCTGAAGAAGTGGTCTAAACAGATTCTGAAAGGATTGAACTATATGCATACTCACGATCCCTGCATCATCCACAGAGATCTCAATTGCAGTAATATTTTCGTCAATGGGAATACTGGCCAGGTCAAGATTGGTGACTTGGGGTTGGCAGCAGTAGTGGGGAAGAACCACTCTGCGCATTCAATCCTGGGGACGCCGGAATTCATGGCACCGGAGTTATACGACGAGGACTACACGGAGCTAGTGGACATATACTCATTTGGAATGTGTGTATTGGAGATGGTGACCACAGAGATTCCTTATAGCGAGTGTGACAATGTGGCCAGGATATACAAAAAAGTTTCAGCAGGGGTGAGACCTGAGGCACTGAACAAGATCAAAGATGAAGAGGTTAAGGCTTTCATTGAGAGGTGCCTTGCTCAGCCAAGGGCAAGGCCGTCTGCTGCTCAGCTTCTCAGAGATCCTTTCTTTGACGGCACTGTTGATGATGACGAAAATGATCATATTATTTCCTAA 894 0.4877 MPMVEPEGSGDTEAFVEVDPTRRYGRYPELLGSGAVKRVYRAFDQEEGIEVAWNQVKLRNFSDNPAMLERLYSEVRLLRNLANKNIISLYHFWTDGERSTLNFITEVCSSGNLREYRKKHRHVSMKALKKWSKQILKGLNYMHTHDPCIIHRDLNCSNIFVNGNTGQVKIGDLGLAAVVGKNHSAHSILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTTEIPYSECDNVARIYKKVSAGVRPEALNKIKDEEVKAFIERCLAQPRARPSAAQLLRDPFFDGTVDDDENDHIIS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01717 297 FunFam Probable serine/threonine-protein kinase WNK1 10 106 - -
Accr4g01717 297 PIRSF TyrPK_CSF1-R 118 280 - -
Accr4g01717 297 PIRSF TyrPK_CSF1-R 22 131 - -
Accr4g01717 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 284 - -
Accr4g01717 297 SUPERFAMILY Protein kinase-like (PK-like) 18 284 IPR011009 -
Accr4g01717 297 FunFam probable serine/threonine-protein kinase WNK9 108 290 - -
Accr4g01717 297 CDD STKc_WNK 23 283 - -
Accr4g01717 297 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01717 297 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01717 297 Gene3D Phosphorylase Kinase; domain 1 10 106 - -
Accr4g01717 297 Gene3D Transferase(Phosphotransferase) domain 1 108 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01717 Accr-Chr4 18195500 18197062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01717 5 287 MAP Kinase Kinase Kinase AT5G55560 80.919 1.73e-179 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Accr4g01717 Pkinase 3.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01717 K08867 - pvy:116111266 518.85