Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01712 ATGGAAACTTCTGCGAAACGTTCCTATGGATCCGGAAGGTTCTATGTTGAGCAACCAGACTATAACTCATCTGATAACACCAGCCAAGCAACAGCTTACTCTTCAGTTCAGACTTTAGAACAACATTACACCCTAGAATCTTCCTCAAGAACAAACAGTTTTCCAAACCATAATAATTCTTCATCCACTGCCAATTTCTCGCCTGATGACAGCCCTGCATCACAGCTGGAGTCAAATTCTTACGCCCTAATTTCTCAACACTCACTCAAAATCATCAATGGATCCTTCGAGAATGATTCTTGCTTGACAAATGACTTTGATGACTTGAGCCTTGTGATAAGAGAGTTCGAGACTGCTATGCAGGGACCTGATACAGAAATTCCGGGGATATATGATACTCTAGTTCCTTTGGAATCTAATCAGGTTTTGTCAGAGGCAGAAAAGTGGAAGCTAACAATGGAGACAGTATCTAGAGGGGATTTGAAAGGGATGCTTTATGCTTGTGCAAAAGCGATGGATGCAAATGATATGGTGACATTTGAATATTTGATGTCTGAGATGCGGAAAGTGGTTTCCATTTCAGGCAACCCAGTCCAACGAATAGGAGCTTATATGTTGGAATCTCTTGTGGCTAGGATGGCTGGTTCTGGAAGTGCAATCTACAAGGCCTTGAAATGCAGGGAGCCTACCGGTAATGAACTCCTTTCCTACATGCACTTGCTGTATGAAATCTGCCCATACTTCAAGTTTGGGTATCTGTCTGCAAATGGGGCAATTGCTGAAGCCATGAAGGAAGAAAATAGGATCCATATTATTGATTTTCAGATTAACCAGGGCAGCCAGTGGATAAGCCTAATTCAGGCTCTTGCTGGACGACCAGGTGGGCCCCCCGAGCTCAGAATAACTGGTTTTGATGACTCTACTTCGAATTTTGCTCGTGGAGGGGGCCTTGACATTGTGGGGAAACGACTAGCAAGACTTGCAGAATCATGTCAGGTTCCCTTTGAGTTCCATGCTGCTGGAGTTGCTCCTTCAAAGGCACAACTCCAAGACCTTAAGCTTCGACCTGGTGAAGCTATTGCTGTAAATTTTGCCATGATGCTGCACCATATACCAGATGAGAGCGTGGACAGTCACAATCCTCGTGACCGGTTACTGAGATTGGCAAAGCACTTGTGCCCCAAAGTAGTGACTCTTGTGGAGCAGGAATCCAACACCAACCGTGTCCCATTCGTCCCCCGTTTCGCTGAGACACTGAACCATTACTTGGCTATTTTCGAGTCAATTGATGCAGTTCTGCCAAGGGAGCACAAGGAGAGGATCAATGTGGAACAACACTGTCTGGCTCGAGAACTCGTCAACTTAGTAGCATGTGAAGGAGCAGAAAGGGTGGAACGTCATGAGCCGTTGAGGGTGTGGAGGTCGCGCTGTGCCATGGCTGGATTTGAGCCGTATCCATTGAGCTCCTTTGTGAATTCTACCATCAAGAATCTGCTGGAGAAGTACTGTGGAAATTATACTCTAGAAGAGAGAGATGGTGCACTATACCTTGGTTGGATGAATCTACCTCTTGTTGCCTCTTGTGCTTGGAGGTGA 1596 0.4561 METSAKRSYGSGRFYVEQPDYNSSDNTSQATAYSSVQTLEQHYTLESSSRTNSFPNHNNSSSTANFSPDDSPASQLESNSYALISQHSLKIINGSFENDSCLTNDFDDLSLVIREFETAMQGPDTEIPGIYDTLVPLESNQVLSEAEKWKLTMETVSRGDLKGMLYACAKAMDANDMVTFEYLMSEMRKVVSISGNPVQRIGAYMLESLVARMAGSGSAIYKALKCREPTGNELLSYMHLLYEICPYFKFGYLSANGAIAEAMKEENRIHIIDFQINQGSQWISLIQALAGRPGGPPELRITGFDDSTSNFARGGGLDIVGKRLARLAESCQVPFEFHAAGVAPSKAQLQDLKLRPGEAIAVNFAMMLHHIPDESVDSHNPRDRLLRLAKHLCPKVVTLVEQESNTNRVPFVPRFAETLNHYLAIFESIDAVLPREHKERINVEQHCLARELVNLVACEGAERVERHEPLRVWRSRCAMAGFEPYPLSSFVNSTIKNLLEKYCGNYTLEERDGALYLGWMNLPLVASCAWR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01712 531 Pfam GRAS domain family 163 531 IPR005202 -
Accr4g01712 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 98 524 IPR005202 -
Accr4g01712 531 ProSiteProfiles GRAS family profile. 152 531 IPR005202 -
Accr4g01712 531 MobiDBLite consensus disorder prediction 17 75 - -
Accr4g01712 531 MobiDBLite consensus disorder prediction 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01712 Accr-Chr4 18159540 18161135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01712 35 531 GRAS Transcription Factor Family AT1G50600 59.481 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr4g01712 GRAS 9.5e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01712 - - gmx:100785400 719.153