Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01710 ATGGCTACCATTTCCACTTTCTACCCTTACAATCCCGTTTCACCTGCTTCTTCTCTTTCCTCTTTGCGTAACTGCCATTTGCTCTCAAAATCAGCTCGTGCAAGAGGAGCTCACAAGTTCATGGTGCTGGCGGTGCATTCCAACCTTCAAATTCTCAAGACTAATCGCAAATCGAGGTTCGGAAAGGTCCTATCTCCGTATGACAGCGATGCACACGATGAAGCATTGGACGACGAGGACGATGCCATATCAGATGATTGGCTATCTGATGAAGAATTTGCTGAGCCTGCTGACATTGATTTTAATGACGAGAAATTTAAGTCAAAGAAAATAAAAGTAAAAGGTAGGCAACATGAAAAAGGGTGGGATGCAAGATCATTTGAAAGCCCTAAAATGTTAAAAAGTGAGAAAGTGGTATCCTTTGAACCAAATGTCAGTGTAAAGGTTGGTAGAAATTTAAAGGAGAACAGATATCCTCGATTGTCGGAAGAGATAAATTTGGATAAGAAATGGATTCCACTTCTGGACTACTTAAGCACATTTGAAATGGAGGAGTCGCACTTTATCCAAATGTATGAAAGGCACATGTCCTCACTTCAAATTAATGTGTGTTCTGCACAGGAAAGATTGGAATACTTAATGAGTGTTGGTGTCAAACGTAGAGATGTAAGAAGAATCATTTTGAGACAGCCACAAATTCTGGAGTATACAGTTGAAAACAATTTAAAGGCTCATGTTGCATTTTTGATGGGTTTGGGAATTCCGAATTCCAGAATAGGGCAAATCATTGCTGCCTCTCCATCGCTGTTTTCTTATAGTGTTGAAAATTCTTTAAAACCAACAGTAAGATATTTAGTTGAGGAAGTAGGCATCAAGGAGAAGGACCTGAGTAAAGTCATTCAGCTGAGCCCACAAATTCTTGTACAGCGTATTGACATTTCCTGGAATATTCGGTGTATGTTTCTAAGTAAAGAGTTGGGAGCACCCAGAGATAGCGTAGTGAAGATGGTGACCAAACATCCTCAGTTTCTCCATTATAGCATAGATGATGGATTACTGCCTAGGATTAACTTTCTGAGGAGCATAGGAATGAGAAATTCAGACATCCTAAAAGTCTTGACCAGTCTTACACAGGTCCTTTCCCTGTCCCTGGAGGAGAATCTAAAGCCCAAGTACTTGTATCTGGTAAATGAACTTCAGAATGATGTTCAATCCTTGACCAAGTATCCAATGTACCTTAGCTTGTCCTTGGACCAGAGAATACGTCCTCGTCATAGGTTCTTGGTTTCTCTGAAGAAAGCTCCCAAAGGACCATTCCCACTAGGATCACTAGTCCCAACTGATGAATGCTTTTGTCAGCAGTGGGCAGGGACTAGTTTGGATAAGTATTTGGCTTTTCGTCAGAGGCTTTTACTCAAGAAATTTGCTGAAAAATATGAAAAGAAAAATAAAAAGTCTCGGTCCACTTACATGAGTACTAGAAGAGCAGCTTCATGTTAG 1500 0.404 MATISTFYPYNPVSPASSLSSLRNCHLLSKSARARGAHKFMVLAVHSNLQILKTNRKSRFGKVLSPYDSDAHDEALDDEDDAISDDWLSDEEFAEPADIDFNDEKFKSKKIKVKGRQHEKGWDARSFESPKMLKSEKVVSFEPNVSVKVGRNLKENRYPRLSEEINLDKKWIPLLDYLSTFEMEESHFIQMYERHMSSLQINVCSAQERLEYLMSVGVKRRDVRRIILRQPQILEYTVENNLKAHVAFLMGLGIPNSRIGQIIAASPSLFSYSVENSLKPTVRYLVEEVGIKEKDLSKVIQLSPQILVQRIDISWNIRCMFLSKELGAPRDSVVKMVTKHPQFLHYSIDDGLLPRINFLRSIGMRNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELQNDVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLKKFAEKYEKKNKKSRSTYMSTRRAASC 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01710 499 Pfam mTERF 238 430 IPR003690 GO:0003690|GO:0006355
Accr4g01710 499 Pfam mTERF 169 250 IPR003690 GO:0003690|GO:0006355
Accr4g01710 499 PANTHER CGI-12 PROTEIN-RELATED 118 257 IPR003690 GO:0003690|GO:0006355
Accr4g01710 499 SMART mt_12 334 365 IPR003690 GO:0003690|GO:0006355
Accr4g01710 499 SMART mt_12 260 292 IPR003690 GO:0003690|GO:0006355
Accr4g01710 499 SMART mt_12 403 434 IPR003690 GO:0003690|GO:0006355
Accr4g01710 499 SMART mt_12 297 329 IPR003690 GO:0003690|GO:0006355
Accr4g01710 499 SMART mt_12 370 402 IPR003690 GO:0003690|GO:0006355
Accr4g01710 499 SMART mt_12 224 255 IPR003690 GO:0003690|GO:0006355
Accr4g01710 499 FunFam Transcription termination factor MTERF9, chloroplastic 235 470 - -
Accr4g01710 499 Gene3D Transcription termination factor 3, mitochondrial 234 470 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01710 mTERF 5.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01710 K15031 - gmx:100809638 680.248