Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01706 ATGGATATTGCAGACCATACAAGAATGGTTTTCGATAGAATTCAGAAATTTGAACCTGAGTGTGCTAGAAAAATAATTGGCTACCTCCTACTAAAAGAGAATGGTGAGCAGGAATTGTCTACATTAGCGTCATGCCCCGATCGTGTGGTAAGAGCCGTGGCACTTGTGGCCAAAATTGAGCTTCAAAAGTTGGCTGCCAATTCTTCCCTACCTCCTGTTTTACCTCCTTCGAATTCTCCACGACGAGGCTTAAGCCAATTACCCATGAGTGCTTCAAGGAGCCCTACTTCTCCGGCAAGCTTCCCAGTTCAACCGGCTTACCGGGAACAACAGCCTAATACTAACACTACAAACACAAATTTTACAGTGCCCATGAATTACACGGATTCCACATCAGAACTTCAGCAGTGGATGCAGTTGTTTGGCTTAGAAGATAATATAGATCGAATGCATGTTGGAAACAATGGGATTGCGAATGATTATTTTAGATTAGACGCTTCCCCCAGAAATATGAATGCACAAGCTGGGGGAAGTCTTTCGTCCGAACTTCCTATCAAGCCCTGTCACCATTTTAACAGGGGTTTCTGCAAAAATGGAAGTAGTTGTAGATTCTATCACGCTGGGCAAGTTGGTCCAGAGAGACTTTCTCTAACGCTTGGAAATGATGCTAATAATGATGATCAGTTAATTTCACTGGGTTCTCTAGCACAGTTAGAGTCAGAACTGTTGTTTCTAATGTATTGA 744 0.4274 MDIADHTRMVFDRIQKFEPECARKIIGYLLLKENGEQELSTLASCPDRVVRAVALVAKIELQKLAANSSLPPVLPPSNSPRRGLSQLPMSASRSPTSPASFPVQPAYREQQPNTNTTNTNFTVPMNYTDSTSELQQWMQLFGLEDNIDRMHVGNNGIANDYFRLDASPRNMNAQAGGSLSSELPIKPCHHFNRGFCKNGSSCRFYHAGQVGPERLSLTLGNDANNDDQLISLGSLAQLESELLFLMY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01706 247 SUPERFAMILY CCCH zinc finger 184 206 IPR036855 GO:0046872
Accr4g01706 247 ProSiteProfiles Zinc finger C3H1-type profile. 182 209 IPR000571 GO:0046872
Accr4g01706 247 MobiDBLite consensus disorder prediction 68 122 - -
Accr4g01706 247 Gene3D - 178 227 - -
Accr4g01706 247 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) 1 243 - -
Accr4g01706 247 MobiDBLite consensus disorder prediction 79 122 - -
Accr4g01706 247 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 186 206 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01706 Accr-Chr4 18074970 18075713 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr4g01706 zf-CCCH 0.00016 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01706 - - gmx:100818984 218.394