Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01689 ATGGCTACAAATGCTCACCGTTTTGTAGAATGGAAGGAGCAGTTTATTTCACAGGAGCGTGGCAATCGAGTAGTCCACTATTACCTGAAGGATTCTGCTGGGGATTCCATACTTGCAGTTGTGGGCACTGAGAGGAGCCTGAGACACATGTTCTATGTTGTTGCTGAGGAGTTTCTTGAAGTTTGTGGGAAGGAAGGTGCCATCCATGCTGGTTTCAAATGGAGGTCCAGAAGAGAGGTAGTAGATTGGTTGACATCAATGCTATCAAAGCAGCATCAGCCGGGAGACAAGAGTGTGTTGCCAAGTCATAACTTGACACAAGCTCACGAGACCACAAATAGAAGTCTCAGAGAATTTATTGATCTGCATACACGTATATCAGATAAGGGCCTTCTAATGAGCAGCTTCAAAGGACACAATTCTGACATTGTTTGGTCAGGTGTTGCCTGGACATGTGGCAAACAGCTTAAACATTATCCTGCTTTTTACAGGAATGGGATCAAAATAGCAATTCAATCGTTCGTTTTTGTCATGGCAACGGGAGAAACTCATTATATTGCATATTTGGAGGACATGTATGAAGACAGAAGGGGTCAGAAAAAGGTTAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTATGATTCCCGTTAAAAATACTCACCCTCAAGAAGTTTTTATCACATCTTATTCTCAAGTAATCAGTGCTGAGTGTGTTGATGGCCCGGCTACAGTCTTAACTCGGGAACATTATGAAAGACTCTTGCCTGCTTTTTCTCCTGCCTCATCAAATAGAATCCACATGTGCTTTAGGCAATTCAGAAGCAACAAAGTGAAGGCATTTGACTTGAGTAAATTGCGTGGCTACCTTGATCAACCTGTTCTTTCTTGCTTGAACCTTGATTCCTTCCGAAACCCAAAATGTAATAACCTTGCTGAAGAAGATGAAGAGTTGAGCCTGGGTGATGATGTAAGGCCTGAAGGTAAGAGAAGAAAAAGAGGTAGAGGGTCTTCTGAGCATTTGATAGATCACCAGGGAGTTAGGAAACTAAGTAGAAGTCAACAAATGATGGTGGACAAAACCGTAAAAAATGTAGATTATTCTAGGCCAGGTAGGAGATTGCTTTCCCAGAAACAGGTTGATTATCAGCCTTGGTATAGCTCCAAATACGAGGTTGATGACAAGATAGAGTTACTCTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTGCAAGTATCTCGGAAACAGATTAAAGTCCAATATATTGATGTGCAGGATGAAGATGGAGGTGGCAACCTTGAGGAATGGATCCCTGCTTTCAAACTTGCCATGCCAGATAAACTTGGGATGAGACATTCTGGCCGGCCCACCATCAGACCAGCCCCAACTAATGAGGGGCAACAAGAACTGGCTGTGGGGATCGGAACTGCAGTAGATGCATGGTGGAGTGATGGTTGGTGGGAGGGGGTTGTAAGTGGAATCGATGACTGTGACGATGATAATGTGCATGTTTACTTTCCCGGTGAAGGTCTGTTAAGGAAAATATGCAAGAAGGATCTAAGAGTATCACGAGATTGGGTGGGGGACCGATGGGTTGATATTGAGCGAAACCCTAATGTAGCCTCTACTGTATTTGCAGTTAATAGCTCTAACAACACAAAGTTTTCTGCGACCCCATCTACCATCAAAGATGCTGACTCTTCTGGGGTTGTTATTTCATGTCAAGGTGTTCCTATTAGTGAGAAGTCTAACAATGAACAAAATGATGTTGCTGAAGACATGAACATGGTTATTGATAACAAGCCCCCTTCACAAGAAGAGGCAAGTAAAGAGGCAAGTACTGAAGTTGTTGAGACTGAGCAACATGGAAGTTGCGATAACAAAGATAACCATGATGACGGCAATGAGGATAAGGAAGAGAACGATGGCGATTATAACAAAAGGGTCGATAATGTTGTGAGGGATATGGAGGTCTGTGGGACTTCTGGGGAGGACTCTCAAGCTGTGGCACCCATGGAAGTGGCTGTTTAA 2052 0.4357 MATNAHRFVEWKEQFISQERGNRVVHYYLKDSAGDSILAVVGTERSLRHMFYVVAEEFLEVCGKEGAIHAGFKWRSRREVVDWLTSMLSKQHQPGDKSVLPSHNLTQAHETTNRSLREFIDLHTRISDKGLLMSSFKGHNSDIVWSGVAWTCGKQLKHYPAFYRNGIKIAIQSFVFVMATGETHYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKGMIPVKNTHPQEVFITSYSQVISAECVDGPATVLTREHYERLLPAFSPASSNRIHMCFRQFRSNKVKAFDLSKLRGYLDQPVLSCLNLDSFRNPKCNNLAEEDEELSLGDDVRPEGKRRKRGRGSSEHLIDHQGVRKLSRSQQMMVDKTVKNVDYSRPGRRLLSQKQVDYQPWYSSKYEVDDKIELLCQDSGIRGCWFRCTVVQVSRKQIKVQYIDVQDEDGGGNLEEWIPAFKLAMPDKLGMRHSGRPTIRPAPTNEGQQELAVGIGTAVDAWWSDGWWEGVVSGIDDCDDDNVHVYFPGEGLLRKICKKDLRVSRDWVGDRWVDIERNPNVASTVFAVNSSNNTKFSATPSTIKDADSSGVVISCQGVPISEKSNNEQNDVAEDMNMVIDNKPPSQEEASKEASTEVVETEQHGSCDNKDNHDDGNEDKEENDGDYNKRVDNVVRDMEVCGTSGEDSQAVAPMEVAV 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01689 683 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
Accr4g01689 683 MobiDBLite consensus disorder prediction 317 347 - -
Accr4g01689 683 Gene3D - 136 292 IPR043151 -
Accr4g01689 683 MobiDBLite consensus disorder prediction 324 347 - -
Accr4g01689 683 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 369 613 - -
Accr4g01689 683 MobiDBLite consensus disorder prediction 611 658 - -
Accr4g01689 683 SMART BAH_4 167 287 IPR001025 GO:0003682
Accr4g01689 683 SMART agenet_At_2 390 455 IPR014002 -
Accr4g01689 683 SMART agenet_At_2 477 535 IPR014002 -
Accr4g01689 683 MobiDBLite consensus disorder prediction 607 658 - -
Accr4g01689 683 CDD Tudor_Agenet_AtDUF_rpt1_3 392 469 - -
Accr4g01689 683 Pfam Agenet domain 395 469 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01689 Accr-Chr4 17806907 17810464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01689 404 533 PHD Transcription Factor Family AT5G58610 27.068 1.50e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01689 - - pcin:129318488 1145.57