Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01687 ATGGGGTTATCTGAAGTTTCAATCTTGGTTTTCTGGGTTTGTGTTCAGTTGAATTTAGCACAAGTTCTCTTATCCTTCAACCAAAACCAAGTCAGTAATTACATTAGCTGGAAAGATTTTTCGGTTGATGAACAGAGATTCCCCTGGGACCCCATTGCAGGTGATCGAGTTATTGTCGTTGACCAGCATGGCAGAGGACATTCTAGGACTGTACAAGGAGCTGTGGATATGGTTCCTGATAACAACCCAGAAAGAATGAAAATTTGCATATACCCAGGAATTTACAGAGAGAAAGTGTATGTGCCAAGAACGAAGGGATATGTGTCGATGATAGGAGGACGAAATGAAAGAGAGAGTGCAGTTATTACGTGGAACAGCAAATCATCGGACATAGGTTTTGATGGACAAGAAATTGGGACCTATGATTCTGCAACTGTAACTGTAGAATCTGATTATTTCTGTGCAACGAGGCTCACCTTTGAGAATTCGGTAGAGGCGGTGAGCGGAGGAGATGGGATGCAAGGAGTGGCACTGAGGGTGGACAGTGAAAGGGCCATGTTTTATCGGGTGAGGATCAAAGGGGAACAAGACTCACTGTTGGACAACACAGGAACTCATTATTTCTATCAGTGTCAAATCCAAGGCAAAATTGATTTCATATTTGGCAATTCAAAATCACTCTATCAGAACTGTGATCTTCATTCAGTAGCAGAGACATATGGAGCAATAGCAGCACATCACAGGGATGCAGAAAATGAAGACACAGGCTTCTCCTTTGTGAATTGCTCTATTACGGGCACTGGCAGTGTGTACCTTGGCAGAGCCTGGGGTGACCATTCCAGAATCATCTACTCTCTCTGCTATATGGATGATATCATCATCCCTGAAGGCTGGACTGACTGGAACCACACTTCTAGACAAATGACTGCTGTGTTTGGGGAGTACCAGTGTGAGGGAATTGGAGCAGATAGAAGGAGGAGGGTGAAATGGTCAAAATTTTTGAGCAATGAGGAAGCAAGGCCTTTTCTGGATAGGAGTTTCATAAATGGGGACCAGTGGCTTAATCTATAG 1071 0.437 MGLSEVSILVFWVCVQLNLAQVLLSFNQNQVSNYISWKDFSVDEQRFPWDPIAGDRVIVVDQHGRGHSRTVQGAVDMVPDNNPERMKICIYPGIYREKVYVPRTKGYVSMIGGRNERESAVITWNSKSSDIGFDGQEIGTYDSATVTVESDYFCATRLTFENSVEAVSGGDGMQGVALRVDSERAMFYRVRIKGEQDSLLDNTGTHYFYQCQIQGKIDFIFGNSKSLYQNCDLHSVAETYGAIAAHHRDAENEDTGFSFVNCSITGTGSVYLGRAWGDHSRIIYSLCYMDDIIIPEGWTDWNHTSRQMTAVFGEYQCEGIGADRRRRVKWSKFLSNEEARPFLDRSFINGDQWLNL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01687 356 FunFam Pectinesterase 53 356 - -
Accr4g01687 356 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 54 355 - -
Accr4g01687 356 Gene3D - 54 356 IPR012334 -
Accr4g01687 356 Pfam Pectinesterase 58 351 IPR000070 GO:0030599|GO:0042545
Accr4g01687 356 SUPERFAMILY Pectin lyase-like 55 355 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01687 Accr-Chr4 17803965 17806221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01687 3 307 Carbohydrate Esterase AT5G55590 54.462 1.24e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01687 K01051 - gmx:100813382 463.766