Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01662 ATGATGAGAGAACAGGACCAGTACATGCCGGTGGCGAACGTCATCAGGATCATGCGACGGATCCTTCCGCCGCACGCTAAGATCTCCGACGAAGCCAAAGAGACGATCCAAGAGTGTGTCTCTGAGTACATAAGCTTCATCACCAGCGAAGCTAACCAGCGGTGCCAGCAAGAGCAGCGCAAGACGGTAACGGCGGATGACTTGATGTGGGCCATGGAGAAGCTCGGTTTTGACGACTACGTAGGCCCTCTCTCTCTCTACCTCCAGCGTTACCGTAACGGTGACGGTGGTTCTGGTGGTGTCCAGTATGTCCCACCGCCACAGCAAGTGCCGGCACCATCGGAGCCCGTACCAGTAGTAATGCCGTCGCCACCCCCGCAGCCATCGTACTATTACGGGTCGGGTTATAATTATCCGGTGGGGCCGAATCAGATGGGGTCTGGTGCGGGTAGCTCAAGCGGCACTGGTGGCGGCGTTCCGGCGTATTATGATCCGTTTGGTCACCTGAGAAATGACCGTTTCTGA 525 0.5676 MMREQDQYMPVANVIRIMRRILPPHAKISDEAKETIQECVSEYISFITSEANQRCQQEQRKTVTADDLMWAMEKLGFDDYVGPLSLYLQRYRNGDGGSGGVQYVPPPQQVPAPSEPVPVVMPSPPPQPSYYYGSGYNYPVGPNQMGSGAGSSSGTGGGVPAYYDPFGHLRNDRF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01662 174 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 9 72 IPR003958 -
Accr4g01662 174 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 96 IPR027113 GO:0001228|GO:0006355|GO:0016602
Accr4g01662 174 PRINTS CCAAT-binding transcription factor subunit A signature 36 54 - -
Accr4g01662 174 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Accr4g01662 174 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Accr4g01662 174 FunFam Nuclear transcription factor Y subunit B-6 1 109 - -
Accr4g01662 174 SUPERFAMILY Histone-fold 5 103 IPR009072 GO:0046982
Accr4g01662 174 Gene3D Histone, subunit A 1 98 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01662 Accr-Chr4 17534932 17535456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01662 2 99 CCAAT-HAP3 Transcription Factor Family AT5G47670 75.510 6.24e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Accr4g01662 CBFD_NFYB_HMF 2e-24 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01662 K08065 - thj:104811667 176.407