Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01661 ATGGGCGTATCCAACCCAGCCGGACACGGCGGAGCTCCGTTGAACCCAAGCCAGATTCAGCCGCAGCGCGTCATGATGAGAGAACAGGACCAGTACATGCCGGTGGCGAACGTCATCAGGATCATGCGACGGATCCTTCCGCCGCACGCTAAGATCTCCGACGAAGCCAAAGAGACGATCCAAGAGTGTGTCTCTGAGTACATAAGCTTCATCACCAGCGAAGCTAACCAGCGGTGCCAGCAAGAGCAGCGCAAGACGGTAACGGCGGATGACTTGATGTGGGCCATGGAGAAGCTCGGTTTTGACGACTACGTAGGCCCTCTCTCTCTCTACCTCCAGCGTTACCGTAACGGTGACGGTGGTTCTGGTGGTGTCCAGTATGTCCCACCGCCACAGCAAGTGCCGGCACCATCGGAGCCCGTACCAGTAGTAATGCCGTCGCCACCCCCGCAGCCATCGTACTATTACGGGTCGGGTTATAATTATCCGGTGGGGCCGAATCAGATGGGGTCTGGTGCGGGTAGCTCAAGCGGCACTGGTGGCGGCGTTCCGGCGTATTATGATCCGTTTGGTCACCTGAGAAATGACCGTTTCTGA 597 0.5779 MGVSNPAGHGGAPLNPSQIQPQRVMMREQDQYMPVANVIRIMRRILPPHAKISDEAKETIQECVSEYISFITSEANQRCQQEQRKTVTADDLMWAMEKLGFDDYVGPLSLYLQRYRNGDGGSGGVQYVPPPQQVPAPSEPVPVVMPSPPPQPSYYYGSGYNYPVGPNQMGSGAGSSSGTGGGVPAYYDPFGHLRNDRF 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01661 198 FunFam Nuclear transcription factor Y subunit B-6 21 133 - -
Accr4g01661 198 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 22 119 IPR027113 GO:0001228|GO:0006355|GO:0016602
Accr4g01661 198 MobiDBLite consensus disorder prediction 1 20 - -
Accr4g01661 198 SUPERFAMILY Histone-fold 29 127 IPR009072 GO:0046982
Accr4g01661 198 PRINTS CCAAT-binding transcription factor subunit A signature 79 97 - -
Accr4g01661 198 PRINTS CCAAT-binding transcription factor subunit A signature 98 116 - -
Accr4g01661 198 PRINTS CCAAT-binding transcription factor subunit A signature 60 78 - -
Accr4g01661 198 Gene3D Histone, subunit A 22 122 IPR009072 GO:0046982
Accr4g01661 198 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 33 96 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01661 Accr-Chr4 17534932 17535528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01661 22 123 CCAAT-HAP3 Transcription Factor Family AT5G47670 72.549 4.23e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Accr4g01661 CBFD_NFYB_HMF 2.7e-24 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01661 K08065 - thj:104811667 182.956