Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01640 ATGGAAATCAGGAGGGAGGATGGTGATGGTGATGGTGATTCTCAGGAGATTTCTCTGCAGATTGCAGCAGCAAGCAATAGCTTTGGTCACAGCATAGAGTTGATGTCTAAGCCTCCTTACCTTACCAATACTAACATTAATAACAACAACAGGTTCTCTCATATTGACATTCTGGTTGATCATTCCACAATGAACAGGGATCGTCCTGTCCCCATATTTCTCAAGTTTGAGGATGTAGAGTACAAGGTGAGGAACCATGCAGTGTCCAGGTTGAAGAAGACGGTGTCAAAGGTGGCCATACAAGTCAGTGAAAGCCAAGACAGATACAAGAAAATCTTGAAGGGTATGACCGGAAGCATAGGCCCTGGTGAGATCCTTGCTCTCATGGGTCCTTCTGGTAGTGGCAAGACAACCTTGTTGAAAGTCATCGGAGGAAGATTAAGCGACAATGTCAAAGGAAAAGTTACTTACAATGATGTTGGATACAATTCTGCCATCAAGAGAAGGATTGGATTTGTGACACAAGATGATGTTCTGTTCCCACAACTAACAGTGGAAGAAACATTAGTCTACTCTGCATTGTTAAGGTTGCCATCCAACATGAGCCTACAACAAAAACATCAGAGAGTGGAGGCAACTCTAAAGGATCTAGGCCTTGAAAGGTGTAGGAACACAAAAATAGGAGGAGGATTCATTAAAGGCATATCAGGAGGGGAAAGGAAGAGAACCAGCATAGGGCATGAGATTCTTGTGGATCCTTCACTGCTTCTACTTGATGAGCCAACCTCAGGCCTTGATTCCTCTTCAGCAAACAGACTCCTTCTCACTCTTCATGGACTTGCCAAGGCTGGAAGGACAATAATCACAACAATTCACCAGCCATCCAGCAGGATCTTTCACACGTTTGACAAACTCCTTCTAATATCAGAAGGCTATCCAATTTATTATGGGAAGGCTATAGATTCAATGGACTATTTCTCATCCTTGAGGTTCATCCCAGACATACCCATGAATCCTGCAGAGTTCTTGCTTGACTTAGCCACTGGACAAGTGAATGACATAAGCATTCCTGAAGACATTTTGGAACATCAAGAATCTAATGACCCTTCAAAAGTTGTCATAAAACATCTACAACTCAAGTACAAGACTTTACAGGAGCCAAAGGAGAAAGAAGAGAACCATGGAGCAATGAAGGCACCAGAAAATCTACAAGTAGCCATTCAAGCAAAGAAGGAGTACACATTAAGTTGGATAGACCAGTTCATGATTCTGTCAAAGAGAACATTCAAAACAAGATGCAAAGACTACTTCGATAAGGTCAGACTAATTCAGGCACTTGGAGTTGCGGTCTTGCTGGGCCTTCTTTGGTGGAAATCTTCAACTCACACAGAGGCTCAACTTAGAGATCAGGTGGGGTTAATGTTCTACATCTGTATATTCTGGACATCTTCATGTATCTTTGGAGCAGTCTATGTGTTTCCATTTGAAAAGATATATTTGGTGAAGGAAAGGAAAGCAGACATGTACAGATTAAGTGTATACTATGCATGCAGCACTCTGTGTGATATGATAGCTCATGTGTTCTACCCAACTTTTTTCATGTTCATCGTGTACTTCATGGCTGGCTTCGAGAAAACTCTCACTGCTTTCTCCCTCACACTACTCTCTGTGCTTCTGATAGCCATTACCAGTCAAGGAGCAGGAGAATTGTTTGGAGCTGCAATTATGAGTATTCAAAAATCTGGCGTGGTTGCTTCTTTGATCCTAATGATGTTCCTTCTCACTGGCGGCTACTATGTCCAGCACATACCAGTGTTCATGAGGTGGTTGAAGTACTTGTCGTTCATGTACTATGGGTTCAGGCTGCTGCTAAAAGTGCAGTACTCAGGAGATGAACTGTATGAATGCGAAAGCTTTGGAGGGTGCAGGACTCTGCAGAGCTCTCCTTCGTTCGACACAGTGAACTTGGAAGGAGGTTTGAAAGAAGCTTGGGTTCTTCTCGCCATGGCTCTCACCTTTCGCCTCTTAGCTTACTTGTGCCTCCGCTCCAAAATTGAAGCCTCCACCCTCTAA 2073 0.4327 MEIRREDGDGDGDSQEISLQIAAASNSFGHSIELMSKPPYLTNTNINNNNRFSHIDILVDHSTMNRDRPVPIFLKFEDVEYKVRNHAVSRLKKTVSKVAIQVSESQDRYKKILKGMTGSIGPGEILALMGPSGSGKTTLLKVIGGRLSDNVKGKVTYNDVGYNSAIKRRIGFVTQDDVLFPQLTVEETLVYSALLRLPSNMSLQQKHQRVEATLKDLGLERCRNTKIGGGFIKGISGGERKRTSIGHEILVDPSLLLLDEPTSGLDSSSANRLLLTLHGLAKAGRTIITTIHQPSSRIFHTFDKLLLISEGYPIYYGKAIDSMDYFSSLRFIPDIPMNPAEFLLDLATGQVNDISIPEDILEHQESNDPSKVVIKHLQLKYKTLQEPKEKEENHGAMKAPENLQVAIQAKKEYTLSWIDQFMILSKRTFKTRCKDYFDKVRLIQALGVAVLLGLLWWKSSTHTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKIYLVKERKADMYRLSVYYACSTLCDMIAHVFYPTFFMFIVYFMAGFEKTLTAFSLTLLSVLLIAITSQGAGELFGAAIMSIQKSGVVASLILMMFLLTGGYYVQHIPVFMRWLKYLSFMYYGFRLLLKVQYSGDELYECESFGGCRTLQSSPSFDTVNLEGGLKEAWVLLAMALTFRLLAYLCLRSKIEASTL 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01640 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 678 - -
Accr4g01640 690 Pfam ABC transporter 113 263 IPR003439 GO:0005524
Accr4g01640 690 Coils Coil 200 220 - -
Accr4g01640 690 Gene3D - 94 328 IPR027417 -
Accr4g01640 690 FunFam ABC transporter G family member 22 100 329 - -
Accr4g01640 690 Pfam ABC-2 type transporter 420 628 IPR013525 GO:0016020|GO:0140359
Accr4g01640 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 335 IPR003439 GO:0005524
Accr4g01640 690 SMART AAA_5 122 313 IPR003593 GO:0016887
Accr4g01640 690 CDD ABCG_EPDR 109 317 - -
Accr4g01640 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01640 Accr-Chr4 17260745 17265188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01640 111 296 Calmodulin-binding Proteins AT2G36910 29.688 7.32e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01640 K05681 - qsa:O6P43_013516 1045.8