Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01629 ATGCTTGGAAGCTTAAGAAATCCCTCAGTTTCTCCCCGATTCTCCTCACTTCTCTCAATAAACTCTCTTTTCTTCTGCTTCTTCTTCTTCTCATGTTGCTACTCTATTGATGAACAAGGCCAAGTTCTTCTTGCATGGAAGAACAGTTTGAACAGTAGAGGAGATGCACTATTAGCATCTTGGAATCCTTCAGATTCAAGCCCTTGCAAATGGGTTGGTGTTGGCTGCAACTCCAGAGGGGAAGTGGAGGAGATAAGCTTGAAATCTGTGGACCTGAAAGGTTCATCATTACCTTCAAAGTTTCAAGCTTTAAAAAAGTCCTTGAAGGTTCTTGTCCTTTCTTCAACCAACCTCACAGGTTCTATCCCCAGAGAAATTGGAGACTGTGAGGAGCTTGTTTCTATTGATCTTAGTGGGAATTATCTCTCAGGTGAAATACCAGAAGATATTTGCAGGCTGAGTAAACTTGAGAGTTTGTCTCTCCATGCAAACTTTCTTGAAGGTAATATCCCTTCCAACATTGGGAATCTCTCTAGTCTTGTGAATTTGACACTCTATGACAACCAGCTCAGTGGTGGAATCCCAATGAATTTGGGGAATTTAAGGAGGCTTCAAGTTTTCAGAGCAGGTGGGAATAAGAACCTTAAAGGTGAGCTGCCATGGGAGATTGGAAACTGCACCAGCTTGGTCATGTTAGGACTTGCAGAAACCAGCATTTCTGGGAGCCTTCCTTCTTCAATAGGAATGCTGAAGAACATTCAAACCATAGCTATTTACACAACTCTCTTGTCAGGCTCAATTCCAAAGGAGATTGGGAATTGCAGTGAGTTGCAGAATTTGTACTTGTATCAGAACTCTATTTCAGGTCCAATCCCAAGTCAACTTGGAAATCTCAGAAAGCTTCAGAGTATTCTCTTATGGCAGAACAGTCTTGCAGGGACAATCCCAGAAGAGCTTGGAAGCTGCACAGAGCTCAAAGTCATAGACTTTTCAGTGAATCTCCTCACTGGAAGCATACCAAGGAGCTTTGGGATGCTTTCAAATATTGAAGAAATCCAGCTAAGTGTTAATCAGTTGACAGGTAGTATACCTCCTGAGATTACTAATTGCACTTCTCTGACTCAGTTAGAAGTTGACAACAATGCTCTTTCTGGAGAGATTCCTGCTCTTATAGGCAACTTGAAAAGCTTGAGTCTGTTCTTTGCATGGCAGAACAGGCTCACTGGGAAAATCCCAGAAAGTCTGTCTCATTGCCAAGATCTTGAGGCACTTGATCTGTCTTACAACAACCTGATTGGTTCAATACCAAAATCACTTTTTGGGTTGAGGAATCTCACTAAATTCTTGCTTCTTTCCAATGAACTATCAGGTTTTGTTCCTCCTGATATAGGAAACTGCACAAGTCTCTTCAGGTTAAGGTTGAACAGAAACAGATTCTCTGGGTCAATTCCACCTGAGATAGGAAACTTGAAAAACCTCAACTTCATGGATATGAGCAGCAATCACTTTGTGGGGCAGATTCCTTCAACATTATCTGAATGTGAGAGTCTTCAGTTTATTGACCTTCATTCGAATTCTCTCACAGGTTCAATCCCAGATTCTCTCCCAAGAAGTCTTCGATTAATGGATTTCTCAGATAACAGGCTCATTGGTTCACTGACGCGTACCAATATTGGTTCATTAAGTGAACTAACCAAACTCAATCTGGGAAAGAATCAACTCAGTGGGAAAATCCCAGAAGAGATCTCATCTTGCTCTAAGCTTCAGCTTCTTGACCTGGGAAGCAATGAGTTCTCCGGAGAAATTCCAAAACAATTGGGTCAAATCCCATCATTGGAAATCTCTTTAAACCTCAGCTTCAATCAATTTTCTGGCCAAATCCCACCTCAAATCTCTGGTCTCACAAAACTGGCTGTACTTGATATCTCCCACAACAACCTCTCAGGGAATCTGAACTCTCTCTCTGACCTTCAAAACCTCGTTTCCTTGAACGTCTCCTTCAACTACTTCTCTGGTGAATTACCCGACACCCCGTTTTTCAAAAAGCTGCCATTAAGTGACCTCACCCCAAATAAAGGCCTCTATATCTCCGGCGCCGATGGTTTGACTCCGGTCGACGGAGTGGAGCCCAGTAAAGTCCATGCGAGATCAGCAATGAATTTCATCATGTCCATTCTCTTGAGCATAACTGCAATACTCGTACTGCTCACAATCTATGCCTTGGTACGTTCTCACATTAAAAACAGAGCAATCATGGAAGATAATAGCTCATGGAAGATGACTTTTTATCAGAAGCTCGAAATCTCCTCCATCGATGACGTCATCAAGAGCCTGACGTCATCCAACGTGATCGGCACGGGAAGCTCCGGCGTGGTGTACAGGGTAACAATCCCCAACAGCTCAATCGGCGAACTAGCCGTTAAAAAAATGTGGTCTTTAGAAGAATGTGGAGCATTCGAATCCGAGATCCGAACTCTGGGTTCGATCCGACACAAGAACATCATTAGACTCCTCGGTTGGGGATCCAACAGGAACCTCAAGCTTTTGTTCTACGACTACCTCCCTAATGGCAGCCTCAGCTCGATGCTTCATGGCTCCGGCAAGGGAGGGGCAGATTGGGAAACAAGGTACGAGGTTGTGGTGGGTGTGGCTCACGCGCTTGCTTATTTACACCACGATTGTGTCCCTCCGATACTGCACGGAGATGTCAAGGCCATGAACGTGTTATTGGATGACAGGTTTCAGGCTTATCTTGCAGATTTCGGATTAGCCAGAATTGTTTGTTACAAAGACGAAGCTCATGATCATAGTTCTGATCCTAAACCACTTCATAAAACGTATCTTGCTGGTTCCTACGGATACATGGCTCCAGAACATGCATCAATGCAGAGAATCACAGAGAAGAGCGATGTGTACAGTTATGGTGTGGTTCTTTTGGAGGTATTGACCGGGAGGCACCCACTAGACCCAACTCTACCTGGTGGTGCACACATGGTTCAGTGGGTTCGGAGCCACTTAGCCAATAAAGGTGACCCATCTGATATTCTGGACACAAAGCTCAGAGGCAGGGCTGATCCAGCCATGCACGAGATGCTTCAAACACTGGCCGTATCATTCCTCTGTGTGAGCACCAAGCCTGAGGATCGTCCTACAATGAAGGACGTTGTGGCCATGCTCAAAGAAATCAGACCTGTTGACTCCTCAAGGTTGGATTCTGACGAACTCAAGAAGAAGGCTAATTCTTCATTACACGCCTCGCCCTATCCGCTTCCGCCATCTAAGCACCTCGTCTCGCATCAATCTTCTAATTGTTCCTTTCATTTCTCAGATGACTCAGTCTAA 3342 0.4431 MLGSLRNPSVSPRFSSLLSINSLFFCFFFFSCCYSIDEQGQVLLAWKNSLNSRGDALLASWNPSDSSPCKWVGVGCNSRGEVEEISLKSVDLKGSSLPSKFQALKKSLKVLVLSSTNLTGSIPREIGDCEELVSIDLSGNYLSGEIPEDICRLSKLESLSLHANFLEGNIPSNIGNLSSLVNLTLYDNQLSGGIPMNLGNLRRLQVFRAGGNKNLKGELPWEIGNCTSLVMLGLAETSISGSLPSSIGMLKNIQTIAIYTTLLSGSIPKEIGNCSELQNLYLYQNSISGPIPSQLGNLRKLQSILLWQNSLAGTIPEELGSCTELKVIDFSVNLLTGSIPRSFGMLSNIEEIQLSVNQLTGSIPPEITNCTSLTQLEVDNNALSGEIPALIGNLKSLSLFFAWQNRLTGKIPESLSHCQDLEALDLSYNNLIGSIPKSLFGLRNLTKFLLLSNELSGFVPPDIGNCTSLFRLRLNRNRFSGSIPPEIGNLKNLNFMDMSSNHFVGQIPSTLSECESLQFIDLHSNSLTGSIPDSLPRSLRLMDFSDNRLIGSLTRTNIGSLSELTKLNLGKNQLSGKIPEEISSCSKLQLLDLGSNEFSGEIPKQLGQIPSLEISLNLSFNQFSGQIPPQISGLTKLAVLDISHNNLSGNLNSLSDLQNLVSLNVSFNYFSGELPDTPFFKKLPLSDLTPNKGLYISGADGLTPVDGVEPSKVHARSAMNFIMSILLSITAILVLLTIYALVRSHIKNRAIMEDNSSWKMTFYQKLEISSIDDVIKSLTSSNVIGTGSSGVVYRVTIPNSSIGELAVKKMWSLEECGAFESEIRTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSMLHGSGKGGADWETRYEVVVGVAHALAYLHHDCVPPILHGDVKAMNVLLDDRFQAYLADFGLARIVCYKDEAHDHSSDPKPLHKTYLAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGRHPLDPTLPGGAHMVQWVRSHLANKGDPSDILDTKLRGRADPAMHEMLQTLAVSFLCVSTKPEDRPTMKDVVAMLKEIRPVDSSRLDSDELKKKANSSLHASPYPLPPSKHLVSHQSSNCSFHFSDDSV 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01629 1113 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Accr4g01629 1113 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Accr4g01629 1113 Gene3D Ribonuclease Inhibitor 373 614 IPR032675 -
Accr4g01629 1113 SMART serkin_6 778 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01629 1113 SMART LRR_sd22_2 153 179 - -
Accr4g01629 1113 SMART LRR_sd22_2 274 300 - -
Accr4g01629 1113 SMART LRR_sd22_2 561 584 - -
Accr4g01629 1113 SMART LRR_sd22_2 394 417 - -
Accr4g01629 1113 SMART LRR_sd22_2 634 659 - -
Accr4g01629 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 898 910 IPR008271 GO:0004672|GO:0006468
Accr4g01629 1113 ProSitePatterns Protein kinases ATP-binding region signature. 784 809 IPR017441 GO:0005524
Accr4g01629 1113 Gene3D Ribonuclease Inhibitor 36 193 IPR032675 -
Accr4g01629 1113 Pfam Leucine rich repeat 537 597 IPR001611 GO:0005515
Accr4g01629 1113 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 854 1077 - -
Accr4g01629 1113 FunFam Putative LRR receptor-like serine/threonine-protein kinase 762 853 - -
Accr4g01629 1113 FunFam Putative LRR receptor-like serine/threonine-protein kinase 615 700 - -
Accr4g01629 1113 Pfam Protein tyrosine and serine/threonine kinase 780 1059 IPR001245 GO:0004672|GO:0006468
Accr4g01629 1113 MobiDBLite consensus disorder prediction 1067 1103 - -
Accr4g01629 1113 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 213 338 - -
Accr4g01629 1113 SUPERFAMILY L domain-like 36 312 - -
Accr4g01629 1113 SUPERFAMILY RNI-like 291 664 - -
Accr4g01629 1113 FunFam Leucine-rich receptor-like protein kinase family protein 36 200 - -
Accr4g01629 1113 SMART LRR_typ_2 418 442 IPR003591 -
Accr4g01629 1113 SMART LRR_typ_2 298 322 IPR003591 -
Accr4g01629 1113 SMART LRR_typ_2 490 514 IPR003591 -
Accr4g01629 1113 SMART LRR_typ_2 153 177 IPR003591 -
Accr4g01629 1113 SMART LRR_typ_2 561 585 IPR003591 -
Accr4g01629 1113 SMART LRR_typ_2 634 657 IPR003591 -
Accr4g01629 1113 SMART LRR_typ_2 346 370 IPR003591 -
Accr4g01629 1113 FunFam Leucine-rich receptor-like protein kinase family protein 341 614 - -
Accr4g01629 1113 Gene3D Ribonuclease Inhibitor 194 288 IPR032675 -
Accr4g01629 1113 Gene3D Ribonuclease Inhibitor 615 699 IPR032675 -
Accr4g01629 1113 Gene3D Ribonuclease Inhibitor 289 362 IPR032675 -
Accr4g01629 1113 Gene3D Transferase(Phosphotransferase) domain 1 854 1084 - -
Accr4g01629 1113 Gene3D Phosphorylase Kinase; domain 1 740 853 - -
Accr4g01629 1113 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 354 1054 - -
Accr4g01629 1113 ProSiteProfiles Leucine-rich repeat profile. 636 658 IPR001611 GO:0005515
Accr4g01629 1113 ProSiteProfiles Protein kinase domain profile. 778 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01629 1113 SUPERFAMILY Protein kinase-like (PK-like) 761 1059 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01629 Accr-Chr4 17102426 17106404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01629 33 1113 Receptor kinase-like Gene Family AT5G56040 66.236 0.0 1400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g01629 PK_Tyr_Ser-Thr 2.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01629 - - gmx:100802880 1569.67