Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01627 ATGGAGTCATCCTCTGGGGTTCATTTTTCTGGATTTCACATGAATGGTTCAGCACAGAGGAATGCTGGGGCTGAGCAACCTACAACTTCAGCTACTGACATGTATACACAACCTTTTGTCATAGGTGTTGCTGGGGGAGCTGCATCTGGGAAGACTACAGTTTGTGATATGATTATTCAGCAGCTCCATGATCAACGAGTTGTACTTGTTACTCAGGATTCTTTTTATCATAATTTGACTGAAGAGGGTCTTACAAGAGTCCAAGATTACAACTTTGATCATCCTGATGCTTTTGACACTGAGGAATTATTACGGGTTATGGACAAGTTAAGGCGTGGACAAGCTGTAGATATTCCAAACTATGACTCAAAGAGTTACAAGAGTGATGTGCTTCCAGCAAGAAGGGTGAATCCTTCAGATGTTATAATTTTAGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGCTGATGAATATGAAGATATTTGTCGACACAGATGCTGATGTACGTTTGGCTAGGAGAATTAGGCGTGATACTTGTGAGAAGGCGCGGGATATTGGCTTAGTGCTTGATCAGTATTCTAAATTTGTAAAGCCGGCTTTTGATGACTTTATTCTTCCAACAAAGAAATATGCTGACATCATTATACCGCGTGGAGGAGATAATCATGTAGCCATTGATTTGATCGTACAACATATCCGAACGAAGCTTGGTCAGCATGATTTGTGTAAAATATATCCTAATTTATATGTCATTCAAACAACTTTTCAGATAAGGGGTATGCACACCCTGATACGTGATTCTGAGACAACGAAACATGATTTTGTGTTTTATGCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGCCTGGGGCATCTTCCATTTACGGAAAAGCAAGTAATAACTCCAACTGAGTCTGTATATACTGGCGTGGACTTTTGCAAGAGGTTATGTGGTGTCTCTGTTATCAGGAGTGGAGAGAGTATGGAAAATGCTTTACGTGCATGCTGTAAAGGTATCAAGATTGGTAAAATTCTTATTCATAGAGAAGGCGATAATGGTCAACAGCTAATATATGAGAAGTTGCCCAAAGATATCTCAGATAGACATGTGCTGCTATTGGACCCTATCCTAGGAACAGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTCCTCAGAAAGGGTGTACCAGAATCCAACATTATATTCCTCAACCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAGAGATTTCCCAGAATTAAAATAGTGACATCCGAGATTGATTTTGGTTTGAATGAAGATTTTCGTGTTGTACCTGGCATGGGTGAGTTTGGGGACCGTTATTTTGGAACAGATGAGGACGACGACCAACATGTGGTGGCTCCTTTACAAGAGTGA 1416 0.4068 MESSSGVHFSGFHMNGSAQRNAGAEQPTTSATDMYTQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVTQDSFYHNLTEEGLTRVQDYNFDHPDAFDTEELLRVMDKLRRGQAVDIPNYDSKSYKSDVLPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTCEKARDIGLVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQTTFQIRGMHTLIRDSETTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTESVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPKDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPESNIIFLNLISAPQGVHVVCKRFPRIKIVTSEIDFGLNEDFRVVPGMGEFGDRYFGTDEDDDQHVVAPLQE 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01627 471 CDD UMPK 40 238 IPR000764 -
Accr4g01627 471 Gene3D - 35 241 IPR027417 -
Accr4g01627 471 FunFam Uridine kinase 35 241 - -
Accr4g01627 471 SUPERFAMILY PRTase-like 241 458 IPR029057 -
Accr4g01627 471 MobiDBLite consensus disorder prediction 1 29 - -
Accr4g01627 471 CDD PRTases_typeI 315 430 IPR000836 -
Accr4g01627 471 PRINTS Uridine kinase signature 184 195 - -
Accr4g01627 471 PRINTS Uridine kinase signature 113 128 - -
Accr4g01627 471 PRINTS Uridine kinase signature 68 79 - -
Accr4g01627 471 PRINTS Uridine kinase signature 170 180 - -
Accr4g01627 471 PRINTS Uridine kinase signature 38 55 - -
Accr4g01627 471 PRINTS Uridine kinase signature 206 219 - -
Accr4g01627 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 231 IPR027417 -
Accr4g01627 471 PANTHER URIDINE KINASE 33 368 - -
Accr4g01627 471 FunFam Uridine kinase 242 457 - -
Accr4g01627 471 Pfam Phosphoribulokinase / Uridine kinase family 40 226 IPR006083 GO:0005524|GO:0016301
Accr4g01627 471 NCBIfam uridine kinase 38 238 IPR000764 -
Accr4g01627 471 Gene3D - 242 457 IPR029057 -
Accr4g01627 471 Pfam Uracil phosphoribosyltransferase 256 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01627 Accr-Chr4 17074183 17079359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01627 1 460 PRT Gene Family AT4G26510 83.333 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01627 K00876 - gmx:100798205 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01627 4 17074183 17079359 Accr3g01825 3 24509158 24518098 CCT