Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01610 ATGAGCGATTCTGCTTACAGAGTTGAAACCACTTCGCGTCTTGCCCAATGGAGAATCGAAAACCCTGCTTCCTGCACTTATCGAAAATCTGATCCTTTCAGGATCGGCAAGTGGAATTGGCATTTGGCCGTGGAGAAGAACAGGGTTTTATTTATAAAACTATATCCCGAAATATCAAATCTAACCAGAGACAACCCGCCGATTGCATCTTTCATCATTCGGGTCGTTAGTTCTGCTTCGGATCGTAAGGCCTTGACCCATCCAGTAGTAAGAGACAGATTGATCAAGAACAGCGAAGACTTTGTTTGGCCACTTGAGGTTCCAGTAACTGGGAAATTCATTATTGACGTCGAGTTCCTTGATTTGAAGACAGCATCCCCAAACGGTGGAGAACCTTGCTCCATCTGGGCCATAGGACCTACGCCGAAGGCATCTAATGCAACAGCTCTTGAAGCTCTTGGTCAGATGCTAACTGAAGGAATCCATACAGACATAGTGATCAATGCATCTGATGGAAGCATTGGAGCTCATCGTGCTGTTCTTGCTGCTCGATCTCCCGTCTTTCACAGCATGTTCTCACATAACCTTAAGGAGAAGGAGCTATCAACCATAAACATTGAAGATATGACCATTGATGCTTGCCAGGCATTCCTCAAATATCTTTATGGTAACATAAAAACTGAAGAATTTCTCACACACAGGCTTGTCCTTCTTCATGCTGCTGACAAGTATGACATATCTGACCTGAAAGAGGCATGCCATGAAAGCCTTGTAGAAGATATTGATACCAAAAATGTTCTTGAGAGGCTTCAAAATGCATCCCTGTACCAGTTGCCAAAACTGAAGAGTAGCTGTTTACGGTATCTCGTAAAATTTGGGAAACTATTTGACGTTCGTGAGGATTTCAACTCCTTCCTGCAGTGTGCAGATCGGGATCTGATTACTGAAGTCTTCCATGAAGTTCTAAATGCCTGGAGAGGGTTCTGA 987 0.4377 MSDSAYRVETTSRLAQWRIENPASCTYRKSDPFRIGKWNWHLAVEKNRVLFIKLYPEISNLTRDNPPIASFIIRVVSSASDRKALTHPVVRDRLIKNSEDFVWPLEVPVTGKFIIDVEFLDLKTASPNGGEPCSIWAIGPTPKASNATALEALGQMLTEGIHTDIVINASDGSIGAHRAVLAARSPVFHSMFSHNLKEKELSTINIEDMTIDACQAFLKYLYGNIKTEEFLTHRLVLLHAADKYDISDLKEACHESLVEDIDTKNVLERLQNASLYQLPKLKSSCLRYLVKFGKLFDVREDFNSFLQCADRDLITEVFHEVLNAWRGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01610 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Accr4g01610 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Accr4g01610 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Accr4g01610 328 Pfam BTB/POZ domain 155 259 IPR000210 GO:0005515
Accr4g01610 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
Accr4g01610 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Accr4g01610 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01610 Accr-Chr4 16768539 16770330 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr4g01610 BTB 3.8e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01610 K10523 - cave:132175628 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01610 4 16768539 16770330 Accr4g01610 4 16768539 16770330 ECH