Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01602 ATGTCTGAGACATGCAGGGTGGACTCTCTAAATGAAAGACCAGTTCAGGAGATCGAAAACGAGAGTCCTCGTATCCCTGAAATATCTGCTCAGAAGTCAGAATCCACCACGCATCAGAAAACACTAAGGAGAATTGTCTGCAACAGTGTAAAAATTGTAATTTTCTCAAATCGACTCAACTTGCTTCTGCCTCTTGGGCCTTTGGCAATTATTGTGGAGAGATTGACTAATCATCACGGTTGGGTCTTCACTCTGAGTTTGTTGGGTATAATGCCTTTGGCTGAACGGTTAGGTTATGCTACAGAGCAACTGGCGTTTTACTCTGGAGACACTGTTGGGGGTCTTCTAAATGCCACTTTTGGAAATGCAACAGAACTGATAATATCAATATATGCGTTGAAAAGAGGAATGACACGAGTTGTTCAACTCTCTTTGTTGGGGTCAATTTTGTCTAACATGTTGTTGGTGCTTGGATGTGCTTTTTTTGGTGGTGGGATTGTTTTTAATAAGAAGGAGCAGGTTTTCAACAAGGGAACTGCTACCGTGAATGCAGGATTGTTGTTGATGGCAGTCATGGGCCTACTTTTCCCTGCTGTTCTTCACTACACACACACCGAGGTCCATTTTGGGAGTTCAGAGTTGGCCCTTTCAAGATTTAGCAGCTGCATCATGCTTGTGGCTTATGCTGCATACCTATTTTTCCAGTTAAATAGTCAAAGAAGTCTATATCTCTCTTTGAATGAGGAGGAGGGGGATCACGGAAACAGCATAGAAGACGATGAATCTCCTGATATCTCAAAATGGGAATCAGTAATCTGGCTTGCAATTATGACTGCTTTGATATCAGTTCTGTCAGAATATTTAGTTGGTGCTATAGAGGGAGCATCAACTTCATGGAAGATGCCAGTGTCTTTTATCAGTGTAATATTGCTTCCCCTAGTGGGAAATGCTGCTGAGCATGCCAGCGCTGTCATGTTTGCCATGAAAGATAAGCTTGATATTTCCTTGGGAGTAGCAATAGGTTCATCCACACAGATATCTATGTTTGTGATCCCACTTTGTGTGATCATTGGGTGGATAATGGGGCATCCTTTGGACTTAAACTTTCAACTTTTTGAGACGGCAACACTGTTTCTAACCATTATTGTTGTAGTCCTCTTGTTGCAGGAAGGGACTTCTAATTACTTCAAGGGACTTATGCTTATTCTATGCTATCTGATAGTGGCAGCTAGTTTCTTTGTACATGCAGATCCTTCTTACTAG 1263 0.4188 MSETCRVDSLNERPVQEIENESPRIPEISAQKSESTTHQKTLRRIVCNSVKIVIFSNRLNLLLPLGPLAIIVERLTNHHGWVFTLSLLGIMPLAERLGYATEQLAFYSGDTVGGLLNATFGNATELIISIYALKRGMTRVVQLSLLGSILSNMLLVLGCAFFGGGIVFNKKEQVFNKGTATVNAGLLLMAVMGLLFPAVLHYTHTEVHFGSSELALSRFSSCIMLVAYAAYLFFQLNSQRSLYLSLNEEEGDHGNSIEDDESPDISKWESVIWLAIMTALISVLSEYLVGAIEGASTSWKMPVSFISVILLPLVGNAAEHASAVMFAMKDKLDISLGVAIGSSTQISMFVIPLCVIIGWIMGHPLDLNFQLFETATLFLTIIVVVLLLQEGTSNYFKGLMLILCYLIVAASFFVHADPSY 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01602 420 FunFam Vacuolar cation/proton exchanger 258 414 - -
Accr4g01602 420 MobiDBLite consensus disorder prediction 1 36 - -
Accr4g01602 420 Gene3D - 108 250 IPR044880 -
Accr4g01602 420 Gene3D - 255 414 IPR044880 -
Accr4g01602 420 Pfam Sodium/calcium exchanger protein 270 410 IPR004837 GO:0016020|GO:0055085
Accr4g01602 420 Pfam Sodium/calcium exchanger protein 81 236 IPR004837 GO:0016020|GO:0055085
Accr4g01602 420 NCBIfam calcium/proton exchanger 64 413 IPR004798 GO:0006816|GO:0015369
Accr4g01602 420 FunFam Vacuolar cation/proton exchanger 110 249 - -
Accr4g01602 420 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 30 418 IPR004713 GO:0006812|GO:0008324|GO:0016020
Accr4g01602 420 NCBIfam calcium/proton exchanger 47 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01602 Accr-Chr4 16660686 16664859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01602 9 418 Antiporters AT1G55730 72.881 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01602 K07300 - qsa:O6P43_021359 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01602 4 16660686 16664859 Accr4g01602 4 16660686 16664859 ECH