Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01571 ATGGAGTTAACTCCAAGAGGAAGAACCCAGCACTCTCCTTTGACTTTGAGCTTTGACAGAGATGCAGACTCTGTTTTGGAGCAAGATAGGGAGATTCTCTCGAAGTGGGCTGCCATAGAAAAACTACCCACTTTCAAAAGGATCAGAACTTCGTTTATTGATGTGATTGAAGATGAAGGTGTACAAACCAGCAGCAGCAGCGACATCAATTTAAAATCAGAGAGTAGAAGGCAATTGAGGTCAAACAGTAAAAGGGTCGTTGATGTTACTAAACTTGGAGCACTTGAAAGGCGTTTGTTGATTGACAAGCTCATCAAGCACATTGAGAATGATAATCTCCAGTTACTGAAGAGACTAAGAGAAAGGATTGAGAGGGTGAATGTGAAGATTCCTACTGTGGAGGTCAGGTACAAGAACCTGCATGTAGCAGCAGAATGTGAGGTTGTACAGGGGAAGCCACTTCCTACACTGTGGAACTCTATTATTAGCTTCTTTTCAGGTGTTACGAAGGCAGTGCCTTGTACTTCTCAATGTACCAACATAAGCATTCTTAAGGATGTAAGTGGCGTCATAAAACCATCAAGGCTTACACTTCTTCTTGGCCCACCTGGCAGTGGGAAAACGACCTTGCTATTGGCACTGGCCGGAAAACTTGAGCAATCTCTCAAGGTGACTGGAGAAGTCTCTTACAATGGTCACATGCTAGATGAATTTGTTCCTCAAAAAACATCATCATATATAAGCCAGTATGACCTGCACATACCTGAGATGACAGTGAGGGAAACGATTGACTTTTCAGCCCAATGCCAGGGGGTTGGCGATAGAATGGATATACTGGCTGAAATCACAACCAGAGAGAAAGATGCAGCAATCATCCCTGACCCAGATATTGATGCCTATATGAAGGCAATATCAGTTGAAGGACAAGAAGAAAATCTACAAACTGATTATGTTTTGAAGATTCTTGGGCTTGATATCTGCGCTGACACAATGGTTGGTGATGCATTAGATAGGGGCATTTCAGGTGGACAGAAGAAAAGGCTAACAACAGGAGAGATGATTGTTGGTCCCATAAAAACTTTGTTTATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACTTTTCAAATAATTACCTGTCTCCAGCAGTTGGTGCACATCACAGATGCAACAGCAGTGGTTTCACTTCTTCAGCCAGCTCCTGAAACCTTTGAATTATTTGATGATCTTATACTGATAGCTGAGGGGAAGATTGTATATCATGGCCCATGTGGTCAAGCACTACAATTTTTTGAGGAATGTGGTTTCAAGTGTCCTGAAAGGAAAGGAGTTGCAGACTTTCTCCAGGAAGTAACCTCTAAGAAGGATCAAGGGCAATACTGGTATCGTACAGACACTCCTTACAACTATGTTTCTGCGGATGAGTTCTCTCAAATTTTCAAAACAAGTTATTGGGGACGAAGTTTAAATGATGAGCTCTCAAAGCCATGTGATAAATCTCAATCCCAGAAAAACACTTTATCATTTAGCAAGTATTCCCTGGACAAATGGAAATTGTTCAAAGCTTGCATGAGGAGGGAGATACTTCTCATGAAACGAAACTCCTTTATCTATGTATTCAAAACTGCACAGCTCACAATCACAGCAATCATAACAATGACAGTATTTATACGCACTCAGTTGAATGTAGACATAAAGAGTGCAAACTTTTTACTGGGCTCATTGTATTACACACTTGTCCGCCTCATGACTAATGGAGTCGCTGAGCTTATCTTGACTCTTACCAGACTTCCTGTTGTTTACAAGCAGAAGGAATTCTATCTATATCCAGCATGGGCTTACTGTCTTCCAGCTTCCATTCTAAAGATCCCATTTTCAGTTATTGATTCAATTGTCTGGACTTCAGTAACTTATTACGTTATAGGCTACAGCCCTGAAGTAGAAAGGTTCTTCCGTCAGTTTCTTCTACTTTTCACTGTGCATTTATCATCAACCTCCTTATGCCGATTCCTTGCCTCAGTTTTCCAAACTGATGTTGCAGCTACAACAGTCGGTTCCTTGTTCTTAGTATTGATGTTTTTATTTGGAGGCTTCATTCTTCCTAGACCTTCATTACCATCGTGGTTGAGGTGGGGCTTTTGGCTCTCTCCCATGACATATGGAGAAATTGGATTAACAATAAATGAATTTCTTGCTCCTCGCTGGCAGAAGATTCAAGAGGGAGGCATCTCCATAGGGAGGCAGGTTTTAACTAGTCGTGGTTTAGACTTCAATGCAAACTTCTACTGGCTATCAATTGGGGCATTGCTTGGTTTCACTGTACTTTTTGATTTTGGATTTATCTTAGCATTAAGTTACTTAAAACCTCCAAAGATATCTCGAGCTTTCGTTTCCAAAGCAAAGGCCTCTCAACTACATGGAGGAGAAAATGGCAAGAGCGTGGAGCTAGAAAATAAATCAGTTACAGTTGACATTAGCCAGACCTCAAAGGAAATACAACAAAACACAGGAAAAATGGTCCTGCCCTTTCAGCCGCTGACAGTAGTATTCAAGGATGTCCAGTATTTTGTCGACACCCCTCCAGAAATGAAAAAGCATGGGTCCAATGAGAAAAAACTTCAACTGCTCCGTGATATCACTGGAGCATTTAGGCCTGGAGTTCTCACAGCACTGATGGGAGTGAGTGGAGCAGGGAAAACAACTCTTATGGATGTACTTTCAGGGAGAAAAACTGGAGGTATTATTGAAGGAGATATAAGAATTGGAGGATACCCCAAAGTGCAGAAGACATTTGCTAGAGTTTCAGGTTACTGTGAGCAGGTTGACATACATTCCCCATATATAACAGTTGAAGAATCTGTAAAATACTCAGCATGGTTGCGGTTACCGATGGAGATTGATTCAGTCACAAAAGGGACATTTGTAGAAGAAGTCATTGAAACAATTGAACTTGATGATATAAAGGATCGTTTAGTTGGCATAGCTGGCCAAAGTGGCTTATCAACTGAACAGCGTAAAAGACTTACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACATCAGGTTTGGATGCCCGAGCAGCTGCCATAGTTATGCGTGCAGTGAAGAATGTGGTCGCCACGGGCAGGACCACGGTTTGCACCATACACCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTTATGAAAGCAGGAGGACAGATTATCTATAATGGAAAACTCGGTCACCAGTCGAGCAGACTGATTGAATACTTTCAGAGTATACCAGGAGTGCCAAAGATCAAAGACAATTATAATCCTGCAACCTGGATGCTAGAAGCTACCTCTGCATCTGTAGAAGCAGAATTTAAAGTAGACTTCGCAAAAATCTATAAGGAGTCACCTCTTCACCGGAACACCCTTGAATTGGTACAAGAGTTAAGTGAACCCTCGCCGGGTTCAAAGGACTTGCAATTCTCGACTCGTTTTCCACAAAATTACTTGGGGCAGTTTACTGCATGTCTTTGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTGACACGTTTTCTGTTCATGGTTGTTGCAGCAGTAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAGGAAATAAACAATGAGCAGGATTTGTTCAACATACTCGGATCAATGTATATTGCTGTAATATTCTTAGGCATAAATAACTGTTCATCAATCTTGCCATATGTGGTAACTGAGCGCACTGTCTTGTACCGTGAAAAATTTGCTGGAATGTATTCTCCGCTAGCCTACTCATTTGCACAGGTGACCATTGAGATACCCTATATCTTAGTGCAAGCCATTGTCTATGTGGCTATCACTTACCCAATGATAGGTTACCAATGTTCGGTTGAGAAGATCTTTTGGTACTTCTACACCACATTCTGTACATTTTTGTACTTCGTATATCTCGGAATGTTGATAGTTTCGTTGAGCTTGAATCTCGATTTAGCTTCCATACTCTCAACTGCACTCTACACCATATTCAATCTTTTCTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGTTACTGGCTTTGCCCCACAGCTTGGTCTCTGAATGGCCTATTGACTTCACAATATGGAGACATCGACACGAAGATAACCGTACTTGGGAACCCAAAGCCAGTTGCAGTAGGTGACTTTCTGAAAGACTATTATGGGTTCCATCACGATCGGTTGAACATTGTGGCTGTGGTTCTCATTGCTTTCCCAATTGTTTATGCATTTCTATTTGCCTATTGCATAGGGAAATTGAATTTCCAGAAAAGGTAG 4356 0.4151 MELTPRGRTQHSPLTLSFDRDADSVLEQDREILSKWAAIEKLPTFKRIRTSFIDVIEDEGVQTSSSSDINLKSESRRQLRSNSKRVVDVTKLGALERRLLIDKLIKHIENDNLQLLKRLRERIERVNVKIPTVEVRYKNLHVAAECEVVQGKPLPTLWNSIISFFSGVTKAVPCTSQCTNISILKDVSGVIKPSRLTLLLGPPGSGKTTLLLALAGKLEQSLKVTGEVSYNGHMLDEFVPQKTSSYISQYDLHIPEMTVRETIDFSAQCQGVGDRMDILAEITTREKDAAIIPDPDIDAYMKAISVEGQEENLQTDYVLKILGLDICADTMVGDALDRGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIITCLQQLVHITDATAVVSLLQPAPETFELFDDLILIAEGKIVYHGPCGQALQFFEECGFKCPERKGVADFLQEVTSKKDQGQYWYRTDTPYNYVSADEFSQIFKTSYWGRSLNDELSKPCDKSQSQKNTLSFSKYSLDKWKLFKACMRREILLMKRNSFIYVFKTAQLTITAIITMTVFIRTQLNVDIKSANFLLGSLYYTLVRLMTNGVAELILTLTRLPVVYKQKEFYLYPAWAYCLPASILKIPFSVIDSIVWTSVTYYVIGYSPEVERFFRQFLLLFTVHLSSTSLCRFLASVFQTDVAATTVGSLFLVLMFLFGGFILPRPSLPSWLRWGFWLSPMTYGEIGLTINEFLAPRWQKIQEGGISIGRQVLTSRGLDFNANFYWLSIGALLGFTVLFDFGFILALSYLKPPKISRAFVSKAKASQLHGGENGKSVELENKSVTVDISQTSKEIQQNTGKMVLPFQPLTVVFKDVQYFVDTPPEMKKHGSNEKKLQLLRDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQVDIHSPYITVEESVKYSAWLRLPMEIDSVTKGTFVEEVIETIELDDIKDRLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKAGGQIIYNGKLGHQSSRLIEYFQSIPGVPKIKDNYNPATWMLEATSASVEAEFKVDFAKIYKESPLHRNTLELVQELSEPSPGSKDLQFSTRFPQNYLGQFTACLWKQHLSYWRSPEYNLTRFLFMVVAAVIFGAVFWQKGKEINNEQDLFNILGSMYIAVIFLGINNCSSILPYVVTERTVLYREKFAGMYSPLAYSFAQVTIEIPYILVQAIVYVAITYPMIGYQCSVEKIFWYFYTTFCTFLYFVYLGMLIVSLSLNLDLASILSTALYTIFNLFSGFLMPGPKIPKWWVWCYWLCPTAWSLNGLLTSQYGDIDTKITVLGNPKPVAVGDFLKDYYGFHHDRLNIVAVVLIAFPIVYAFLFAYCIGKLNFQKR 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01571 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 163 441 IPR003439 GO:0005524
Accr4g01571 1451 Pfam Plant PDR ABC transporter associated 736 798 IPR013581 -
Accr4g01571 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 440 IPR027417 -
Accr4g01571 1451 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 24 1451 - -
Accr4g01571 1451 SMART AAA_5 886 1078 IPR003593 GO:0016887
Accr4g01571 1451 SMART AAA_5 193 426 IPR003593 GO:0016887
Accr4g01571 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1085 IPR027417 -
Accr4g01571 1451 Pfam ABC transporter 877 1029 IPR003439 GO:0005524
Accr4g01571 1451 Pfam ABC-2 type transporter 520 731 IPR013525 GO:0016020|GO:0140359
Accr4g01571 1451 Pfam ABC-2 type transporter 1175 1387 IPR013525 GO:0016020|GO:0140359
Accr4g01571 1451 Gene3D - 165 435 IPR027417 -
Accr4g01571 1451 Gene3D - 864 1096 IPR027417 -
Accr4g01571 1451 FunFam ABC transporter G family member 34 172 475 - -
Accr4g01571 1451 Pfam ABC-transporter N-terminal 100 159 IPR029481 -
Accr4g01571 1451 CDD ABCG_PDR_domain2 846 1084 IPR034003 -
Accr4g01571 1451 FunFam ABC transporter G family member 34 863 1095 - -
Accr4g01571 1451 Pfam ABC-2 type transporter 1058 1129 IPR043926 GO:0140359
Accr4g01571 1451 Pfam ABC-2 type transporter 399 451 IPR043926 GO:0140359
Accr4g01571 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 849 1102 IPR003439 GO:0005524
Accr4g01571 1451 Pfam ABC transporter 184 366 IPR003439 GO:0005524
Accr4g01571 1451 CDD ABCG_PDR_domain1 180 423 IPR034001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01571 Accr-Chr4 16405816 16415065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01571 874 1061 Calmodulin-binding Proteins AT2G36910 28.643 3.91e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01571 K08711 - gmx:100779615 2360.87