Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01560 ATGAAGACGACCCCAGAACGCAATTTTCTTCATTCAAGCCAAAGTAGTCAGAATATAGGCAATGATGATACAAACAAGCATAATCAAAGGACTCGTCCCTCTCTCAAATATTTCAAATCTTTTGTCAAGAAATTCGCAGTTTTACTTGCAATCTTTCGCTCTGGCAAGAAAAAATCAGCTGCAGAAGTTTCTGGAGGTGAGGTCACAAGGAATAGTAGAGCCAGATGGGTACCATCATTCTCAACTGATGTATCATCTGAGAGTAACAACAAGAATTCATCATGGAAGTTTTCTAATTCCTACGCAACTTCTAGTGCCGCAAGTGGGCAACTTGGAATGGGGAATTTCTCTTTTGAAGAACTTTACAAGGCAACAGGAAAATTTTCTCCAGATAAAATAATTGGGGAAGGTGGATTTGGTACTGTCTATATGGGGAAGCTTAGTGATGGATCTCTTGTTGCCATAAAGCGCTCCAAGAAGACTGCGCATGACAAGAACTTAGCTGAATTCAAGAATGAAATAAATACCTTGTCAAGAATTGAGCATCTGAATCTGGTGAGGTTATACGGATATTTGGAGCATGAAGATGAAAAGATGATTGTTGTTGAATATGTTAGCCATGGAACACTTCGAGAACATTTGAATGGTACAAGGGGAAATGGACTTGAAATTGGTGAGCGCCTAGACATTGCAATTGATGTTGCTCATGCAATAACTTACCTTCATATGTACACAGATCATCCAATAATCCATAGAGACATCAAATCATCCAATATCTTACTCACAGAAAAATTGAGGGCTAAAGTTGCAGACTTTGGATTTGCTCGTTTGGCTCCAGATGATCCTGCGGCAACCCACATCTCAACCCAAATAAAAGGAACAGCTGGCTACTTGGATCCTGAGTATCTCCGAACATATCAACTCACTGCCAAGAGCGATGTGTATTCATTTGGCGTATTGCTTGTAGAATTGATGACGGGGAGATATCCATTAGAACCAAAGAAACCTCTCGGTGAGAGAGTGACCATCAGATGGGCAATGCAGATGCTGAAACAAGGAGATGCTGTCATAGCCATGGACCCAAGGCTGTGGAGAAGCCCAGCTTCAACCATGGCAATGGACAGGGTTATGAATCTCGCCTTACAATGTCTTGCGCCGGAGAGGCAGTCACGACCTTCCATGAAGATTTGTGCAGAGATTCTTTGGGGAATCAGAAAAGAGTTGAGAGATCAAGCTTTGGCTCATGTTCCCCCTCTTGCTTCTCACCATTCTGCAGATTTCATTCATAAAGGTGATGATGATAAGAAGACAAATATGCTTGTGACATCACTTAATGATGATGAAAATGGCAGCGACAACTATAAAAAATTTGTCTCTGCGTGA 1383 0.4143 MKTTPERNFLHSSQSSQNIGNDDTNKHNQRTRPSLKYFKSFVKKFAVLLAIFRSGKKKSAAEVSGGEVTRNSRARWVPSFSTDVSSESNNKNSSWKFSNSYATSSAASGQLGMGNFSFEELYKATGKFSPDKIIGEGGFGTVYMGKLSDGSLVAIKRSKKTAHDKNLAEFKNEINTLSRIEHLNLVRLYGYLEHEDEKMIVVEYVSHGTLREHLNGTRGNGLEIGERLDIAIDVAHAITYLHMYTDHPIIHRDIKSSNILLTEKLRAKVADFGFARLAPDDPAATHISTQIKGTAGYLDPEYLRTYQLTAKSDVYSFGVLLVELMTGRYPLEPKKPLGERVTIRWAMQMLKQGDAVIAMDPRLWRSPASTMAMDRVMNLALQCLAPERQSRPSMKICAEILWGIRKELRDQALAHVPPLASHHSADFIHKGDDDKKTNMLVTSLNDDENGSDNYKKFVSA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01560 460 Gene3D Phosphorylase Kinase; domain 1 87 204 - -
Accr4g01560 460 Pfam Protein tyrosine and serine/threonine kinase 131 400 IPR001245 GO:0004672|GO:0006468
Accr4g01560 460 Gene3D Transferase(Phosphotransferase) domain 1 205 417 - -
Accr4g01560 460 SMART serkin_6 128 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01560 460 ProSiteProfiles Protein kinase domain profile. 128 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01560 460 MobiDBLite consensus disorder prediction 1 24 - -
Accr4g01560 460 FunFam receptor-like protein kinase FERONIA 88 204 - -
Accr4g01560 460 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Accr4g01560 460 PANTHER OS01G0750732 PROTEIN 49 430 - -
Accr4g01560 460 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 205 415 - -
Accr4g01560 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Accr4g01560 460 SUPERFAMILY Protein kinase-like (PK-like) 106 403 IPR011009 -
Accr4g01560 460 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01560 Accr-Chr4 16287737 16290579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01560 80 394 Trihelix Transcription Factor Family AT1G70460 41.176 2.08e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Accr4g01560 PK_Tyr_Ser-Thr 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01560 - - gmx:100811511 570.466