Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01546 ATGAAGTGGGAAACAACGGGAATGTTGTCACCTGGACAATCCATCACCAGTTCCAACACGAACTGGATTGCTGAAGATAATCGGAATCCGAGATGGACTCGTGCTGAGAACAAAATGTTCGAGAATGCTCTTGCGCTTTACGATCAGGATACACCAGATCGGTGGAAGAAAGTGGCTTCAATGATCCCAGGGAAGACGGTCGGCGATATTCTGAGGCAGTACCAACAGCTTGAAGATGATGTTTATAACATCGAAGCTGGTTTGGTCTCAGTTCCAGACTATTATCACACCACAAATCCTTCTTCCTCATCTTTCACTTTGGACTGTTGGGCCAATTTTTCTTCTGATTATGATCCCTGGAACGAATTCCATAGAAAGAGAGCGTCCTCTATGAGACCGGCCTCTGAGAATGAAAGGAAGAAAGGAGTCCCTTGGACCGAAGAAGAACACAAATTGTTTCTTATGGGGCTGAAGAAGCATGGTAAAGGAGATTGGAGGAACATATCAAGAAACTTTGTGGTGACTCGAACACCGACTCAAGTAGCTAGCCATGCTCAGAAATACTTCATAAGGCAACTCTCCGGAGGAGGAGGGAAAGACAAGAGAAGAGCGAGCATCCATGACATAACCACAGTGAACCTTACTGAAACTTCAACCAGAACTGCACGAAACAAAATCAAGAAGTCTTCTTCTTGTTCTTCTTCTTCTTCACCGCCAGAGACACGCATGAACATGATGATGCCCTCATCACAGTCACACTCACCATCGGTAAAGCAGAATAATTCTGCAGAAACACAGTTTCAGTGGACCCAGCAACAACAACAACAGCCAATGGATGCTCTGAGTAAACCTGTATTTGATGATGAACTGTTCATGTCTAATTTTTATGGGATTTGTGAGGACTCATCATCCCATGGGAATGGTGATGACTCATCGTCCTTTGATTTTAGAATTGAGGACCAGGATCCGTTCTCAAGTTCTCTTCTTTATCATGGATCTTCTTCTTACTTAGAATCTCTCAGTCAAAACATGGTTTTCCCGATGCCATGA 1050 0.439 MKWETTGMLSPGQSITSSNTNWIAEDNRNPRWTRAENKMFENALALYDQDTPDRWKKVASMIPGKTVGDILRQYQQLEDDVYNIEAGLVSVPDYYHTTNPSSSSFTLDCWANFSSDYDPWNEFHRKRASSMRPASENERKKGVPWTEEEHKLFLMGLKKHGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGGGKDKRRASIHDITTVNLTETSTRTARNKIKKSSSCSSSSSPPETRMNMMMPSSQSHSPSVKQNNSAETQFQWTQQQQQQPMDALSKPVFDDELFMSNFYGICEDSSSHGNGDDSSSFDFRIEDQDPFSSSLLYHGSSSYLESLSQNMVFPMP 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01546 349 ProSiteProfiles Myb-like domain profile. 137 189 IPR001005 -
Accr4g01546 349 Gene3D - 143 193 - -
Accr4g01546 349 FunFam Transcription factor SRM1 17 91 - -
Accr4g01546 349 MobiDBLite consensus disorder prediction 1 22 - -
Accr4g01546 349 Gene3D - 23 91 - -
Accr4g01546 349 MobiDBLite consensus disorder prediction 7 22 - -
Accr4g01546 349 ProSiteProfiles SANT domain profile. 145 193 IPR017884 -
Accr4g01546 349 Pfam Myb-like DNA-binding domain 144 189 IPR001005 -
Accr4g01546 349 NCBIfam myb-like DNA-binding domain, SHAQKYF class 140 192 IPR006447 GO:0003677
Accr4g01546 349 MobiDBLite consensus disorder prediction 217 278 - -
Accr4g01546 349 ProSiteProfiles Myb-like domain profile. 24 78 IPR001005 -
Accr4g01546 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 193 IPR017930 -
Accr4g01546 349 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 26 275 IPR043363 -
Accr4g01546 349 CDD SANT 144 189 IPR001005 -
Accr4g01546 349 SUPERFAMILY Homeodomain-like 139 192 IPR009057 -
Accr4g01546 349 FunFam transcription factor MYB1R1 143 194 - -
Accr4g01546 349 SUPERFAMILY Homeodomain-like 30 86 IPR009057 -
Accr4g01546 349 CDD SANT 31 77 IPR001005 -
Accr4g01546 349 SMART sant 28 80 IPR001005 -
Accr4g01546 349 SMART sant 141 191 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01546 Accr-Chr4 15662656 15663894 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr4g01546 Myb_DNA-binding 5.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01546 - - rcu:8286480 295.434