Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01537 ATGGCCACCTTTTCTGGTTTCTTGGGCAAGTTCGTCTCTCTTTTCATACTCTTTGTCCATCTTGGCTGCTTCATCTTCTCCTCCTCCGCCGGTAAAGCGGCAGAACAAGATGCCCGGAAGTCTTCTTCAAAGAAACGCAGGGCATCCCCCGTTTCGCACTCGCGGAAACCTTCTCCTTCACATCCCAGGTTTAAAACCCGTAAGGCTCTTTCTTCTTCTTGGACTTTCGTCAAACACTTTTTCTCCCACAAATCATGCAAAACCAGTGACGTTGCTCAGGGATCGCCGCAATCCTCCTCCTCCACCGCTATTTCCTCTGCTTCCGCCGCACTGCCTTCTTTGACATCCACCAGATCCTCCCAGCAGTCGTTGGTCTCTCTGGCGCAGGCCGAATCGCACGAGCTGGATCTTCCCGGGACAAAAAAGTATGCGTCGTGCCCAGAATCAGATATCGCCGCTGACAACAACCACTTCTTACCCCTCCGCAACGACATCTTCCCCTGCACCGCCTGCGGCGAGGTTTTCCAGAAACCGCAAGTTCTCGAACAGCATCAATCGCAGAAACACGCCGTGTCGGAGCTGGTGGAGACCGACGCGGGCCACAACATAGTGCAGATAATATTCAAGTCAGGTTGGACCAACACACAGAAATGCCCCAAAATAAGTCGGATCCTGAAGATCCATAACCACCCAAAGATCCTCTCCAAGTTCGAAGAATACAGAGAGACGGTGAAGGCCAAGGCCGCCAGAAACGGCGCCGTAAAGAAGCGCGACGAAAGATGCATAGCCGATGGCAACGAGCTCATGAGATTCCACTGTTCCACATTCCTCTGCGACTTAGGACTCAACGGGAATTCCGGCATTTGCGGCCAGCAATATTGTAACATCTGCGGGATCATCAAATCGGGGTTCTCACCCAAGTTGGACGGAATCTCCACGCTATCGACGAGCTGGAGGGCGCACGTGGCCATCCCGGAGGAGGTGGAGGAAGAGTTCAAGTTCATGAACGTGAAGCGGGCCATGCTGGTATGCCGGGTCATAGCGGGTCGGGTCGGCACTGACTCGGACGAAGCTGACAAAGAGGACCTGGGTTTTGATTCGGTGATGGCGCGCGGCGGAAGTGGAGTTTACACCCGGCTGGACGAAGAGGAGCTGTTGGTGTTCAATCCTAGAGCTGTGCTTCCATGCTTTGTGATTGTGTATAGCGTGTGA 1212 0.5371 MATFSGFLGKFVSLFILFVHLGCFIFSSSAGKAAEQDARKSSSKKRRASPVSHSRKPSPSHPRFKTRKALSSSWTFVKHFFSHKSCKTSDVAQGSPQSSSSTAISSASAALPSLTSTRSSQQSLVSLAQAESHELDLPGTKKYASCPESDIAADNNHFLPLRNDIFPCTACGEVFQKPQVLEQHQSQKHAVSELVETDAGHNIVQIIFKSGWTNTQKCPKISRILKIHNHPKILSKFEEYRETVKAKAARNGAVKKRDERCIADGNELMRFHCSTFLCDLGLNGNSGICGQQYCNICGIIKSGFSPKLDGISTLSTSWRAHVAIPEEVEEEFKFMNVKRAMLVCRVIAGRVGTDSDEADKEDLGFDSVMARGGSGVYTRLDEEELLVFNPRAVLPCFVIVYSV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01537 403 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 194 IPR013087 -
Accr4g01537 403 SUPERFAMILY ADP-ribosylation 191 402 - -
Accr4g01537 403 Gene3D - 189 402 - -
Accr4g01537 403 MobiDBLite consensus disorder prediction 36 67 - -
Accr4g01537 403 MobiDBLite consensus disorder prediction 45 63 - -
Accr4g01537 403 ProSitePatterns Zinc finger C2H2 type domain signature. 168 189 IPR013087 -
Accr4g01537 403 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 72 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01537 Accr-Chr4 15567116 15568327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01537 74 403 C2H2 Transcription Factor Family AT2G29660 54.412 9.27e-109 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr4g01537 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01537 - - qsa:O6P43_014008 527.709