Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01532 ATGCCGACCATTGCCAAGCGTAAGGTCGCGAAGGAAGCTCTTTCTGAGACAACGGCCATCTTGCCGGAGAAGACAGCTTCCGATGTCCGATCTGACCCCAACTCCACTCCCTGTAAGAGGAAATTGAGATCCGATGGGCCGCTGATTATGGACAGTCCATTCTCTTCACCCACCAAATGGAAATCGCCTCGACAATGTAGCAGTGAGAGTCCAAATCGCGCTGTCACCGCAAAAGAGACGGTGGCTAATGAAGGTGAAATCAAATCGCATAAATCGCCGTTTAAGTCAACGCAGGATAGTTTTGCTGATAAACCGAAATGGAACCCCAAAGATGGTGAGCAAGTAAGGACAGTGAAGGAGGCATTGCACGTGTCTACGGCACCATCTACAATTGTCTGCCGTGAAGACGAGCAGAATATGGTTTTCGAGTTCTGCAAGTCATGTGTTGAACATAATAAGGCCGGGAGTATGTACATATGTGGGTGTCCCGGCACTGGAAAATCGCTATCCATGGAGAAAGTAAAAAAGCTTTTAGTCGATTGGGCTAAACAGGCAGGCCTCCTTCAGCCCGATGTCTTATCTGTGAACTGTACATCACTTGCAAATACATCTGACATTTTCAGCAAGATGCTTGGATTAAACCAAACACAGGGAAAAAAGACTTCAGCTTCTCCCTTACAACAACTTCAGAGCTTGTACTCTCAGAAGTCGTCAAGCCTGAACATGATATTGATGGTGGTTGACGAATTAGATTATCTGATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCACTCTCACCACTTTCCCATTTTCTAGATGTATATTAATAGGGATATCAAATGCAATTGACCTTGCCGATCGTTTTCTTCCGAGGTTGAAATCATTGAACTGCAAGCCTATAATTGTAACATTTCGAGCATACTCTAAAGACCAGATCCTTAGCATCCTGAAAGAAAGGCTAAGGAAAGTTGCTGCTGCTTCTGGAGACATGCGAAAGGCTCTTTGTATTTGCAGGAGTGCAATTGAGATGCTAGAGGCAGAAATTAGAGAATCTATTGGCCTTTCAGAAATTTCATTGGAAGAGAAAGCTTCGCCTCGACAAAATTTAGCTTCTGACCCCGATCATGTAAAACAAGAAGAATTTGATACTGTAAGGATTGATCATGTGGCTCTAGCCTTGTCCAAAACATATAGATCTCCTGTGGTGGATACAATACAATCTCTACCACATCATCAACAGATTATCCTTTGCTCTTCGATGAAACAGTTCCGTGGAGCAAAGAAAGATACAATCCTTGGTGAGTTGTACAGATCTTACACGGGCATATGTAAATCATCAATGATTCCTCCAGCTGGAATTTTGGAATTTTCGAACATGTGCAGAGTATTGAATGATCAGGGGCTTATTAAACTAGGACCATCACGGGAGGACAAATTGAAGAGGGTGACCCTAAACATAGATGAAACTGATATTACCTTTGCATTGCAGGGAATTCGTTTCTTTAGAAACTGTCTTCAATAA 1527 0.4316 MPTIAKRKVAKEALSETTAILPEKTASDVRSDPNSTPCKRKLRSDGPLIMDSPFSSPTKWKSPRQCSSESPNRAVTAKETVANEGEIKSHKSPFKSTQDSFADKPKWNPKDGEQVRTVKEALHVSTAPSTIVCREDEQNMVFEFCKSCVEHNKAGSMYICGCPGTGKSLSMEKVKKLLVDWAKQAGLLQPDVLSVNCTSLANTSDIFSKMLGLNQTQGKKTSASPLQQLQSLYSQKSSSLNMILMVVDELDYLITKDRAVLHDLFTLTTFPFSRCILIGISNAIDLADRFLPRLKSLNCKPIIVTFRAYSKDQILSILKERLRKVAAASGDMRKALCICRSAIEMLEAEIRESIGLSEISLEEKASPRQNLASDPDHVKQEEFDTVRIDHVALALSKTYRSPVVDTIQSLPHHQQIILCSSMKQFRGAKKDTILGELYRSYTGICKSSMIPPAGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTLNIDETDITFALQGIRFFRNCLQ 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01532 508 SMART Cdc6_C_2 418 497 IPR015163 -
Accr4g01532 508 MobiDBLite consensus disorder prediction 1 111 - -
Accr4g01532 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 357 IPR027417 -
Accr4g01532 508 MobiDBLite consensus disorder prediction 55 77 - -
Accr4g01532 508 FunFam Cell division control protein 112 297 - -
Accr4g01532 508 FunFam Cell division control protein 410 500 - -
Accr4g01532 508 Pfam AAA domain 153 269 IPR003593 GO:0016887
Accr4g01532 508 CDD Cdc6_C 411 493 IPR015163 -
Accr4g01532 508 Gene3D - 299 406 - -
Accr4g01532 508 SUPERFAMILY "Winged helix" DNA-binding domain 403 506 IPR036390 -
Accr4g01532 508 CDD AAA 137 296 - -
Accr4g01532 508 PIRSF Cdc6 2 508 IPR016314 GO:0006270|GO:0051301
Accr4g01532 508 Pfam CDC6, C terminal winged helix domain 418 496 IPR015163 -
Accr4g01532 508 Gene3D - 111 298 IPR027417 -
Accr4g01532 508 Gene3D - 407 498 IPR036388 -
Accr4g01532 508 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 16 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01532 Accr-Chr4 15510917 15516134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01532 29 507 Core DNA Replication Machinery Family AT2G29680 58.185 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01532 K02213 - gmx:100791200 643.269