Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01524 ATGGAGGATGATATTGAGAAGGAAGGAGAGGGAAGTGGGAAGAACAAGAATATGAAGATGATGATGAAGTCAGAGATAATAGAGGGAGATAATGGTAATTTTGGGATAAGGGGTCAATGGTTGAGGAAAATTATGGGCAACTTGCAAGAGGTCATCTTCGGCACTAAGCTAGCTGTGCTTTTTCCCGCCGTCCCCCTCGCTGTTGCCGCTGATACCTATCACTTCGGTCGAGCGTGGATATTTGCTCTGAGCTTACTTGGGCTGGCTCCTCTAGCTGAACGTGTTAGCTTCCTCACTGAACAAATCGCATATTACACTGGCCCAACTGTTGGAGGACTTCTGAATGCAACATGTGGGAATGCAACTGAGATGATAATAGCACTATTGGCACTTCGCAAGAACAAAATCAATGTGGTCAAGTTCTCTCTTTTGGGTTCCATTCTCTCAAATCTCCTTTTAGTTCTTGGTTCTTCGCTTCTCTGTGGAGGCCTTGCCAACCTCAAGAAAGAACAGAGATATGACAGAAAACAGGCAGATGTAAACTCACTCCTTTTGCTTCTGGGGTTACTCTGCCATTTGCTGCCATTGATCTTTAAGTATGCCCTAACAGGGGACCATTACTCTGTAGCCACTAGTACACTTCAATTGTCAAGAGCAAGTAGTATTGTTATGCTTCTTGCTTATGTTGCTTATATCTTCTTCCAATTGAAAACTCACAGACAGTTATATGATTCACAAGAGGAAGATGATGAAGAAGAGAAGGCTGCCATAGGATTTTGGGTGGCATTTACTTGGTTGGTGGGCATGACACTCCTCATATCTTTGCTTTCTGAATATGTTGTGGGAACTATTGAGGCTGCTTCAGAATCTTGGGGTATCTCTGTAAGCTTCATTAGCATAATTTTGCTCCCAATTGTGGGGAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTTTAAGAACAAGCTGGATATATCTCTAGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGTGTAAAAATGGACCTAGATTTTAACCTCCTAGAAACTGGGTGTCTTGCTTTGACAATACTAGTCACAGCTTTCACTTTACAGGATGGAACTTCACACTATATGAAAGGAGTAGTGCTTTTCCTGTGTTACATTGTCATTGCTGCATGCTTTTTTGTTCATAAAGCCCCATTATCCAATCAAATTCTTGGGGAGAATGTTAGATTTCAACCAACTAAGGATGCCATGGCCACTTGA 1296 0.4198 MEDDIEKEGEGSGKNKNMKMMMKSEIIEGDNGNFGIRGQWLRKIMGNLQEVIFGTKLAVLFPAVPLAVAADTYHFGRAWIFALSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALRKNKINVVKFSLLGSILSNLLLVLGSSLLCGGLANLKKEQRYDRKQADVNSLLLLLGLLCHLLPLIFKYALTGDHYSVATSTLQLSRASSIVMLLAYVAYIFFQLKTHRQLYDSQEEDDEEEKAAIGFWVAFTWLVGMTLLISLLSEYVVGTIEAASESWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGVKMDLDFNLLETGCLALTILVTAFTLQDGTSHYMKGVVLFLCYIVIAACFFVHKAPLSNQILGENVRFQPTKDAMAT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01524 431 NCBIfam calcium/proton exchanger 62 405 IPR004798 GO:0006816|GO:0015369
Accr4g01524 431 Gene3D - 253 406 IPR044880 -
Accr4g01524 431 Gene3D - 108 248 IPR044880 -
Accr4g01524 431 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 39 410 IPR004713 GO:0006812|GO:0008324|GO:0016020
Accr4g01524 431 NCBIfam calcium/proton exchanger 43 405 - -
Accr4g01524 431 FunFam Vacuolar cation/proton exchanger 108 251 - -
Accr4g01524 431 Pfam Sodium/calcium exchanger protein 262 403 IPR004837 GO:0016020|GO:0055085
Accr4g01524 431 Pfam Sodium/calcium exchanger protein 78 236 IPR004837 GO:0016020|GO:0055085
Accr4g01524 431 FunFam Vacuolar cation/proton exchanger 252 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01524 Accr-Chr4 15452675 15455604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01524 41 412 Antiporters AT2G38170 68.947 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01524 K07300 - gmx:100802344 603.979