LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr4g01511	ATGACAAATTTAGCCTCGTTTCTTATTTCCATTCCTTTCATCGTCTTCTTCCTTTCTCTGCTCTTACCGACCCCTGTCAACGGCCTTGGCTCTGCATCAACCACCGCCGTAGTCTATGGAACCGGTACCTTCTGCGGCATTGTTGCCGGCGAACCCACCCAGAGGATCCTATGCTATCAAAACGGTCCGAATATCCAAGTCCTTCCCAATGTCTCCTTCCAAGCCATCTCCGGTGGCCGGAGCTTCTTCTGCGGCCTCCTCTCTGGCGGATTCATCCTCCTTTGTTGGGACACCACAGATTCACACTTTCCCTTTCAGCCGAGACGCTTGTATCACAGCACCACCGTCTCATTGACTGATCTAACAGTTGGAGATACTCAGGTTTGTGCCAGAGAGTTGAACACTGGTATTGTAAGATGCTGGAGAGGGAAAGACGGAAACGGCCATGAGTTTCCTTCTCCTAATGAGGGCCTTTATTTTCGCAGGGTCACATCTGGCTGTGGTTTTTCTTGTGGGATTCTGAAAGAAAACAATAGTGTTCATTGTTGGGGTCAGAGAGAAAGTAATGGGGATGAGATTCAGAGACAGTTTAGGAATCTTTCAATGTCAAGCCTAGTTGGAGGAGAATCCCATGTTTGTGGTTTGACTACTAATGGAGATTTGGTCTGCAAAGGAAGCAATAACTCTGGCCAATTGAATATTCCTTTCAGTTCACCTTCAGAATTCTCCAGTCTTGCATTAGGATCGAACTTCACTTGTGCCACTAGAAGCGAAAATGGTCTGATTATGTGTTGGGGAAGAATCAACATGTCTGAGATAGAGCGTGACATGATTCAGAATGTTTCATTCGAGTCAATTGTTGCTGGTTTGGATTATGTTTGTGGGTTAATGACAGCGAATTTGTCTGCAATCTGCTGGGGACCAGGTTGGTCTGGAAGGCTTAATAATAACAGTAACTCTCATACAACAGATCTTTCTTCTCTGGGAATGATAATCCCAGGTCCATGTGTCAAGGATTCTTGTAGCTCTTGCGGCACATATCCGAACTCCCAGATTCTCTGTCACGGGTCTGGAAGAATATGCTATTCCTTCCAAACAGAGAATCCACTCGCAGTGCCATTACCAATCACACCCCAACCTCCACCACCATCTTCACCAAATTCTTCAACCCAACCTGCAGAAACAAGATACGCAAGAGAAAGATTGATACTTCTGATTATCGGATCAGCTGGTGCTTTTGTGGTTCTCTGTTCAGTTATTTTCTGCTTGTGGTTCGGAACATGTCGTTTATTATTGCAGAGAAAATCTGACAATAGTTTAGTTCAAGCCACAAACACTGAAACCGATGTGGATAATATCACTCTTCCCGGTGCTTCAACCACAGACACGACCATAAGATCATTCTCCAGCAAACGACAGAATTCACGGACATTAAGGAGCTACAGAAGAAGTGGGTCATCCTCCGTCGTTGTAATAGACAAGACGGAGACATTCACGTTGTCAGAACTCGCGACAGCCACAAACAACTTCTCCATTGACAACAAAATAGGCTCCGGAAGCTTCGGCATTGTGTACAAAGGAAAGCTAGAAGATGGGCGTGAAGTAGCAATCAAACGAGGAGAAACCTGCACGAGAAAGAAGAAATTCCAAGAAAAAGAAAACGCATTCGACTCAGAAGTTGCTTTGTTATCTAGGCTTAATCATAAACACCTGGTGGGCCTCATAGGATTCTGCGACGAAAACGACGAGAAGCTCCTAGTCTACGAATACATGACCAACGGATCACTCCACTACCACTTACACGACAAGCACAACACCGAAAAAACCAGCAGTACTATAAATTCATGGCGGATGAGGATCAAAATCGCACTGGACGCAGCTAGGGGGATCGAGTATCTTCACAATTACGCAGTACCGTCGATAATTCACAGAGACATAAAGTCGTCAAACATACTATTAGACTCAAACTGGAACGCGAGAGTCTCCGATTTCGGATTATCGTTGATGGGCGACCAAGAACAGATATCTGCGAAAGCTGTGGGAACCGTAGGGTACATAGATCCAGAGTATTATGTGATGAACGTGTTGACTGATAAAAGTGATGTTTATGGATTAGGGGTGGTTATGTTGGAGCTTTTGACGGGGAAGAGGGCGGTGTTTAGGGAGGGGGGTGGCGCAGAGTCGATTCCCGTGGGGGTGGTAGAATACGCCGGGCCGAGGATCGGAGGAGGAGAGCTATGGAATGTGTTGGATAACAGAGTGGGAGAACCAGATGTCAATGAAGTTGAGGGTTTGGAGACAATGGCGTATAGTGCGATGCATTGTGTGAGATTGGAGGCGAAGGAGAGACCAAGTGTGAGTGAAATTGTGGTGAATCTGGAGAGAGCTTTGGCTTCTGTTGATGGTAGTCCTGGCCGGCTCTCTGTTACGGCCTTCTCTTCCTCTGCTCCGTTTGAATGA	2460	0.4618	MTNLASFLISIPFIVFFLSLLLPTPVNGLGSASTTAVVYGTGTFCGIVAGEPTQRILCYQNGPNIQVLPNVSFQAISGGRSFFCGLLSGGFILLCWDTTDSHFPFQPRRLYHSTTVSLTDLTVGDTQVCARELNTGIVRCWRGKDGNGHEFPSPNEGLYFRRVTSGCGFSCGILKENNSVHCWGQRESNGDEIQRQFRNLSMSSLVGGESHVCGLTTNGDLVCKGSNNSGQLNIPFSSPSEFSSLALGSNFTCATRSENGLIMCWGRINMSEIERDMIQNVSFESIVAGLDYVCGLMTANLSAICWGPGWSGRLNNNSNSHTTDLSSLGMIIPGPCVKDSCSSCGTYPNSQILCHGSGRICYSFQTENPLAVPLPITPQPPPPSSPNSSTQPAETRYARERLILLIIGSAGAFVVLCSVIFCLWFGTCRLLLQRKSDNSLVQATNTETDVDNITLPGASTTDTTIRSFSSKRQNSRTLRSYRRSGSSSVVVIDKTETFTLSELATATNNFSIDNKIGSGSFGIVYKGKLEDGREVAIKRGETCTRKKKFQEKENAFDSEVALLSRLNHKHLVGLIGFCDENDEKLLVYEYMTNGSLHYHLHDKHNTEKTSSTINSWRMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILLDSNWNARVSDFGLSLMGDQEQISAKAVGTVGYIDPEYYVMNVLTDKSDVYGLGVVMLELLTGKRAVFREGGGAESIPVGVVEYAGPRIGGGELWNVLDNRVGEPDVNEVEGLETMAYSAMHCVRLEAKERPSVSEIVVNLERALASVDGSPGRLSVTAFSSSAPFE	819

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr4g01511	819	FunFam	receptor-like protein kinase FERONIA	471	590	-	-
	Accr4g01511	819	CDD	STKc_IRAK	516	795	-	-
	Accr4g01511	819	SMART	serkin_6	510	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr4g01511	819	SUPERFAMILY	RCC1/BLIP-II	157	358	IPR009091	-
	Accr4g01511	819	SUPERFAMILY	RCC1/BLIP-II	37	185	IPR009091	-
	Accr4g01511	819	Gene3D	-	18	199	IPR009091	-
	Accr4g01511	819	Gene3D	-	200	377	IPR009091	-
	Accr4g01511	819	MobiDBLite	consensus disorder prediction	373	388	-	-
	Accr4g01511	819	Pfam	Regulator of chromosome condensation (RCC1) repeat	207	231	-	-
	Accr4g01511	819	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	641	653	IPR008271	GO:0004672\|GO:0006468
	Accr4g01511	819	SUPERFAMILY	Protein kinase-like (PK-like)	486	793	IPR011009	-
	Accr4g01511	819	MobiDBLite	consensus disorder prediction	372	393	-	-
	Accr4g01511	819	Gene3D	Transferase(Phosphotransferase) domain 1	591	803	-	-
	Accr4g01511	819	ProSitePatterns	Protein kinases ATP-binding region signature.	516	538	IPR017441	GO:0005524
	Accr4g01511	819	ProSiteProfiles	Protein kinase domain profile.	510	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr4g01511	819	Gene3D	Phosphorylase Kinase; domain 1	470	590	-	-
	Accr4g01511	819	Pfam	Protein kinase domain	511	720	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr4g01511	819	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4	201	803	IPR044815	GO:0004674

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr4g01511	Accr-Chr4	15360599	15363058	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr4g01511	6	808	Receptor kinase-like Gene Family	AT3G55950	51.578	0.0	707

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Accr4g01511		Pkinase	1.1e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr4g01511	-		-	pcin:129301163	1312.36