Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01510 ATGTCGTCCCGTCGATCTGTTACGAGATTAACAAGGTTCCTTGTTCACGGGACCACGCGCTTTCCTTTACCTTCGCCTTTTACCATAACTTACAAGTTCCATTATTTTAATTCTTTTTACTGTTCCCATCGTGCTCGCTGCGTCTTCTTCTTCAACCTTCAACCTTTCTCTCTCAATGAAGAAGAAGAAACGGGCAACTCACCAATGACAAATTTAGCCTCGTTTCTTATTTCCATTCCTTTCATCGTCTTCTTCCTTTCTCTGCTCTTACCGACCCCTGTCAACGGCCTTGGCTCTGCATCAACCACCGCCGTAGTCTATGGAACCGGTACCTTCTGCGGCATTGTTGCCGGCGAACCCACCCAGAGGATCCTATGCTATCAAAACGGTCCGAATATCCAAGTCCTTCCCAATGTCTCCTTCCAAGCCATCTCCGGTGGCCGGAGCTTCTTCTGCGGCCTCCTCTCTGGCGGATTCATCCTCCTTTGTTGGGACACCACAGATTCACACTTTCCCTTTCAGCCGAGACGCTTGTATCACAGCACCACCGTCTCATTGACTGATCTAACAGTTGGAGATACTCAGGTTTGTGCCAGAGAGTTGAACACTGGTATTGTAAGATGCTGGAGAGGGAAAGACGGAAACGGCCATGAGTTTCCTTCTCCTAATGAGGGCCTTTATTTTCGCAGGGTCACATCTGGCTGTGGTTTTTCTTGTGGGATTCTGAAAGAAAACAATAGTGTTCATTGTTGGGGTCAGAGAGAAAGTAATGGGGATGAGATTCAGAGACAGTTTAGGAATCTTTCAATGTCAAGCCTAGTTGGAGGAGAATCCCATGTTTGTGGTTTGACTACTAATGGAGATTTGGTCTGCAAAGGAAGCAATAACTCTGGCCAATTGAATATTCCTTTCAGTTCACCTTCAGAATTCTCCAGTCTTGCATTAGGATCGAACTTCACTTGTGCCACTAGAAGCGAAAATGGTCTGATTATGTGTTGGGGAAGAATCAACATGTCTGAGATAGAGCGTGACATGATTCAGAATGTTTCATTCGAGTCAATTGTTGCTGGTTTGGATTATGTTTGTGGGTTAATGACAGCGAATTTGTCTGCAATCTGCTGGGGACCAGGTTGGTCTGGAAGGCTTAATAATAACAGTAACTCTCATACAACAGATCTTTCTTCTCTGGGAATGATAATCCCAGGTCCATGTGTCAAGGATTCTTGTAGCTCTTGCGGCACATATCCGAACTCCCAGATTCTCTGTCACGGGTCTGGAAGAATATGCTATTCCTTCCAAACAGAGAATCCACTCGCAGTGCCATTACCAATCACACCCCAACCTCCACCACCATCTTCACCAAATTCTTCAACCCAACCTGCAGAAACAAGATACGCAAGAGAAAGATTGATACTTCTGATTATCGGATCAGCTGGTGCTTTTGTGGTTCTCTGTTCAGTTATTTTCTGCTTGTGGTTCGGAACATGTCGTTTATTATTGCAGAGAAAATCTGACAATAGTTTAGTTCAAGCCACAAACACTGAAACCGATGTGGATAATATCACTCTTCCCGGTGCTTCAACCACAGACACGACCATAAGATCATTCTCCAGCAAACGACAGAATTCACGGACATTAAGGAGCTACAGAAGAAGTGGGTCATCCTCCGTCGTTGTAATAGACAAGACGGAGACATTCACGTTGTCAGAACTCGCGACAGCCACAAACAACTTCTCCATTGACAACAAAATAGGCTCCGGAAGCTTCGGCATTGTGTACAAAGGAAAGCTAGAAGATGGGCGTGAAGTAGCAATCAAACGAGGAGAAACCTGCACGAGAAAGAAGAAATTCCAAGAAAAAGAAAACGCATTCGACTCAGAAGTTGCTTTGTTATCTAGGCTTAATCATAAACACCTGGTGGGCCTCATAGGATTCTGCGACGAAAACGACGAGAAGCTCCTAGTCTACGAATACATGACCAACGGATCACTCCACTACCACTTACACGACAAGCACAACACCGAAAAAACCAGCAGTACTATAAATTCATGGCGGATGAGGATCAAAATCGCACTGGACGCAGCTAGGGGGATCGAGTATCTTCACAATTACGCAGTACCGTCGATAATTCACAGAGACATAAAGTCGTCAAACATACTATTAGACTCAAACTGGAACGCGAGAGTCTCCGATTTCGGATTATCGTTGATGGGCGACCAAGAACAGATATCTGCGAAAGCTGTGGGAACCGTAGGGTACATAGATCCAGAGTATTATGTGATGAACGTGTTGACTGATAAAAGTGATGTTTATGGATTAGGGGTGGTTATGTTGGAGCTTTTGACGGGGAAGAGGGCGGTGTTTAGGGAGGGGGGTGGCGCAGAGTCGATTCCCGTGGGGGTGGTAGAATACGCCGGGCCGAGGATCGGAGGAGGAGAGCTATGGAATGTGTTGGATAACAGAGTGGGAGAACCAGATGTCAATGAAGTTGAGGGTTTGGAGACAATGGCGTATAGTGCGATGCATTGTGTGAGATTGGAGGCGAAGGAGAGACCAAGTGTGAGTGAAATTGTGGTGAATCTGGAGAGAGCTTTGGCTTCTGTTGATGGTAGTCCTGGCCGGCTCTCTGTTACGGCCTTCTCTTCCTCTGCTCCGTTTGAATGA 2664 0.4598 MSSRRSVTRLTRFLVHGTTRFPLPSPFTITYKFHYFNSFYCSHRARCVFFFNLQPFSLNEEEETGNSPMTNLASFLISIPFIVFFLSLLLPTPVNGLGSASTTAVVYGTGTFCGIVAGEPTQRILCYQNGPNIQVLPNVSFQAISGGRSFFCGLLSGGFILLCWDTTDSHFPFQPRRLYHSTTVSLTDLTVGDTQVCARELNTGIVRCWRGKDGNGHEFPSPNEGLYFRRVTSGCGFSCGILKENNSVHCWGQRESNGDEIQRQFRNLSMSSLVGGESHVCGLTTNGDLVCKGSNNSGQLNIPFSSPSEFSSLALGSNFTCATRSENGLIMCWGRINMSEIERDMIQNVSFESIVAGLDYVCGLMTANLSAICWGPGWSGRLNNNSNSHTTDLSSLGMIIPGPCVKDSCSSCGTYPNSQILCHGSGRICYSFQTENPLAVPLPITPQPPPPSSPNSSTQPAETRYARERLILLIIGSAGAFVVLCSVIFCLWFGTCRLLLQRKSDNSLVQATNTETDVDNITLPGASTTDTTIRSFSSKRQNSRTLRSYRRSGSSSVVVIDKTETFTLSELATATNNFSIDNKIGSGSFGIVYKGKLEDGREVAIKRGETCTRKKKFQEKENAFDSEVALLSRLNHKHLVGLIGFCDENDEKLLVYEYMTNGSLHYHLHDKHNTEKTSSTINSWRMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILLDSNWNARVSDFGLSLMGDQEQISAKAVGTVGYIDPEYYVMNVLTDKSDVYGLGVVMLELLTGKRAVFREGGGAESIPVGVVEYAGPRIGGGELWNVLDNRVGEPDVNEVEGLETMAYSAMHCVRLEAKERPSVSEIVVNLERALASVDGSPGRLSVTAFSSSAPFE 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01510 887 Pfam Regulator of chromosome condensation (RCC1) repeat 275 299 - -
Accr4g01510 887 CDD STKc_IRAK 584 863 - -
Accr4g01510 887 SUPERFAMILY RCC1/BLIP-II 188 426 IPR009091 -
Accr4g01510 887 Gene3D - 63 269 IPR009091 -
Accr4g01510 887 Gene3D - 270 447 IPR009091 -
Accr4g01510 887 SUPERFAMILY Protein kinase-like (PK-like) 554 861 IPR011009 -
Accr4g01510 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Accr4g01510 887 Gene3D Phosphorylase Kinase; domain 1 538 658 - -
Accr4g01510 887 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 269 871 IPR044815 GO:0004674
Accr4g01510 887 SMART serkin_6 578 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01510 887 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Accr4g01510 887 MobiDBLite consensus disorder prediction 441 456 - -
Accr4g01510 887 FunFam receptor-like protein kinase FERONIA 539 658 - -
Accr4g01510 887 MobiDBLite consensus disorder prediction 440 461 - -
Accr4g01510 887 ProSiteProfiles Protein kinase domain profile. 578 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01510 887 Gene3D Transferase(Phosphotransferase) domain 1 659 871 - -
Accr4g01510 887 Pfam Protein kinase domain 579 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01510 Accr-Chr4 15360395 15363058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01510 74 876 Receptor kinase-like Gene Family AT3G55950 51.578 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Accr4g01510 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01510 - - pcin:129301163 1352.81